| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0056 |
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| Symbol | |
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| ID | 3844437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 52289 |
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| End bp | 53671 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637837362 |
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| Product | porin (omp) ABC transporter protein |
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| Protein accession | YP_438258 |
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| Protein GI | 83718196 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACGA TCATGACGCG CGCCGCACGC CTGTTGGTTC TGCTCACGCT CGCCTGGATT
CCGTTTGCCC GCGCGGAAAC GGACCTGTTG GCCGCCGCGA AGGACGCACT TGCTCACGAT
CCCGCCTACG CGGCGGCGCT CGCCCAGCGT CAGGCCGACG CCACCAAGCG CCGGCAGGGG
CACGCAGGTT TCCTGCCCCA GATCCTGGCG ACCGGAAACG TTCGTTACGG GACGGTCGAT
CAGGAAACCA CCGGCGCACA TTTCTCCGGC GGCGGCTTCG GCTCCAGCAA CGGCATCGCT
TTCGACACGC GCGCCGCCGG CGCGACAGGC GCCGGGTGGG CCATCACGAT CAAGGAAAAC
CTGTTCAGCG CCGAACGAAA CGCCGTCGCC GTCCAGATGA ATGCGGCCGC AGACGCCGGC
GACGCGCAAC TGGCCAGCAC GCGTCAATCC GTCATGCTTG AAGTCGCGCA AACCTACTTC
GCCATCCTGC TCGCGGAAGA CGACGTAGCC GCGCTGAACT CGACCAAGAC TGCTGCGCTC
GAAGCCCGCG ATATCGCACG TGCGCGCTTC GAGGCCGGTG ACGCGTCGAT CACCGACGTC
AGCGACGCCG AGGCGCGCGC GGACCTCGCG AACGCGCAGT TGGTCGCCGC GCAAACCGTG
CTCGATCTGA AGCGAGCCGA ACTTCACGAC CTCACCGGCA ATTCCGACAC GGCGCTGCGC
CACCTTGCTC AAACGTCCAC GCTCGATTCC ATCGATGCGG GCGACTTCGC CGACTGGCAG
GCGCGCGCGA TGACGGGCAA TCCGCTGATC GCGCTGCGCA AGCTGGGCAT GGAAAGCGCA
AGGGCGGAGG CATCGAAGTA TCGCCCCGGA GCCGGGACGA CGGTCGATGC GTTTGCATCG
TACATCGGCG ACCGGACGAA CGGCGCCGGA TACGGCGGCA ACAGTTCGAT GCGCAGCAAC
AGCGCGGTTG TCGGCGTCAT GGTCACCATT CCGCTGTATA CGGGAGGCCT GCGCAATGCC
AAGCGCGACG AAAGCGCGGC ATTGCTTCGC AAAGCCGGGT TCGACGAGGA AACAGCGCGC
ATCGCAGTTG CGCGCGACGT CCGGCAGTCG TTTCTCGGCC TGCGCAGCGC ATTGGCGCAA
GTGGCCGCCC TCACGCTGGC GCTACGGTCG GCCGAACGGC AACTGAACGC GAACCAGACG
GGATTCGAGG CAGGCGATCG TCCATCGATC GACGTCCTGA ACGCGCAACA GGCGCTGTAC
ACGACACGCC GGGATCTCGC GGCGGCCCGC TATCAGGTCG TGATGAACCG GTTGCGGCTC
GCCGCCGCCG CCGGCGAGCT CGACGAGAAG CTGCTGGAAC GGATCAACGG ATATCTTCAA
TAG
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| Protein sequence | MVTIMTRAAR LLVLLTLAWI PFARAETDLL AAAKDALAHD PAYAAALAQR QADATKRRQG
HAGFLPQILA TGNVRYGTVD QETTGAHFSG GGFGSSNGIA FDTRAAGATG AGWAITIKEN
LFSAERNAVA VQMNAAADAG DAQLASTRQS VMLEVAQTYF AILLAEDDVA ALNSTKTAAL
EARDIARARF EAGDASITDV SDAEARADLA NAQLVAAQTV LDLKRAELHD LTGNSDTALR
HLAQTSTLDS IDAGDFADWQ ARAMTGNPLI ALRKLGMESA RAEASKYRPG AGTTVDAFAS
YIGDRTNGAG YGGNSSMRSN SAVVGVMVTI PLYTGGLRNA KRDESAALLR KAGFDEETAR
IAVARDVRQS FLGLRSALAQ VAALTLALRS AERQLNANQT GFEAGDRPSI DVLNAQQALY
TTRRDLAAAR YQVVMNRLRL AAAAGELDEK LLERINGYLQ
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