| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0050 |
|---|
| Symbol | pcaC |
|---|
| ID | 3846498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 46516 |
|---|
| End bp | 46902 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637837356 |
|---|
| Product | 4-carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_438252 |
|---|
| Protein GI | 83717458 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG AACAACGTTA CGAAGCGGGC ATGAACGTGC GCCGCGCGGT GCTTGGCGAT
GCGCACGTCG ACCGCTCGCT CGAGAATCGC ACCGAGCTGA CGGAAGATTT CCAGAACCTG
ATCACGCGCT ATGCGTGGGG TGAGATCTGG ACGCGCGACG GCCTGCCTCG CCACACGCGC
AGCCTGCTGA CGATCGCGAT GATGGTCGCG CTCAATCGCG GCGAGGAGCT TGCGCTGCAC
CTGCGCGCGG CGAAGAACAA CGGCGTGACG CGCGACGAGA TCAAGGAAGT GCTGCTGCAA
ACCGCGATCT ACTGCGGCGT GCCCGCGGCG AATTCGGCGT TCCATTTCGC GCAGCGCATC
TTCGGCGAGG AAGACGCGGC GAGCTGA
|
|---|
| Protein sequence | MNDEQRYEAG MNVRRAVLGD AHVDRSLENR TELTEDFQNL ITRYAWGEIW TRDGLPRHTR
SLLTIAMMVA LNRGEELALH LRAAKNNGVT RDEIKEVLLQ TAIYCGVPAA NSAFHFAQRI
FGEEDAAS
|
|---|
| |