| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0014 |
|---|
| Symbol | |
|---|
| ID | 3845918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 12508 |
|---|
| End bp | 13515 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637837320 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_438216 |
|---|
| Protein GI | 83716204 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTAG CGCGATCGTC GATCCATGCA TTTTATTTAT TTCTGGAAGG ATTAAAATCG
GCCATTCGGT TAATCAACTT TCCACGCATC GTGAATAATT CGCCGAACCT CGACGACCTG
CGCGTGTTCA GTGCCGTCGT GAGGCTCGCG AGCTTCAGCG CGGCGGCCGA GCAACTCGCG
GTGTCTCCCG CGTACGTCAG CAAGCGCGTC GCGCTGCTCG AAAAGCGGCT CGGTACGCGG
CTTTTGCATC GCTCGACGCG CCGCGTCGCG GTGACGGAGG CCGGCGAGCG CGTCTTTGCG
TGGGCCGAGA AGATTCTCGA CGACGTCGAC CATCTCGTCG AAGACGTGTC CACCACCCGC
AGCGTGCCGC GCGGCACGCT GCGCATTTCA AGCAGCTTCG GCTTCGGCCG GCACGTGCTC
GCGCCTGCGC TGCTCGACTT CAGCGAACGC TATCCGCAGC TCGACGTGCG GCTCGATCTG
TTCGATCGGC TCGTCGACGT CGCGGGCGAA GGCTTCGATC TCGACATCCG GATCGGCGAC
GAGATCGCCG ATCATCTGAT CGCGAAGCGG CTTGCGACGA ACTATCGGGT GCTGTGCGCG
TCGCCCGGCT ATCTCGCGCG ATGCGGCACG CCGCGCCAGC TCGCGGATCT CGCCGCGCAT
CAGTGCCTCG CGATCAAGGA GCGCGATCAC CCGTTCGGCG TATGGCGGCT CACGGTGCGC
GGCGAGACGT CGACGGTGAA GGTTGGCGGC GCGCTGTCGA CGAATCACGG CGAGGTCGCC
GTGCAGTGGG CGCTTGCCGG ACGCGGGATC GTGCTGCGCT CGATCTGGGA GGCGGGGCCG
CTGCTCGCGA GCGGCAAGCT CGAGCGCGTG CTGCCGGACG CGCTCCAGCC GGCGAATGTA
TGGGCCGTGT ATCCGGCGCG GCTCGCGGCT TCGGCCAAGG TGCGCGTGTG CGTCGATTTT
CTCGCCGACG CGTTCGCGCA CCTGAACGAG CGCGCGAACG GCGGATAA
|
|---|
| Protein sequence | MELARSSIHA FYLFLEGLKS AIRLINFPRI VNNSPNLDDL RVFSAVVRLA SFSAAAEQLA
VSPAYVSKRV ALLEKRLGTR LLHRSTRRVA VTEAGERVFA WAEKILDDVD HLVEDVSTTR
SVPRGTLRIS SSFGFGRHVL APALLDFSER YPQLDVRLDL FDRLVDVAGE GFDLDIRIGD
EIADHLIAKR LATNYRVLCA SPGYLARCGT PRQLADLAAH QCLAIKERDH PFGVWRLTVR
GETSTVKVGG ALSTNHGEVA VQWALAGRGI VLRSIWEAGP LLASGKLERV LPDALQPANV
WAVYPARLAA SAKVRVCVDF LADAFAHLNE RANGG
|
|---|
| |