Gene Moth_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_2454 
SymbolrpsC 
ID3832204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp2562836 
End bp2563495 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content54% 
IMG OID637830373 
Product30S ribosomal protein S3 
Protein accessionYP_431279 
Protein GI83591270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01008] ribosomal protein S3, eukaryotic/archaeal type
[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.14409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCAAA AAGTGCACCC CAAGGGGTTA CGCCTGGGGA TAATCCGCGA TTGGGACTCC 
CGCTGGTACG CTGGCAAAGA ATATAAAACT CTCCTCCACG AGGACCTCAA AATTCGCGAG
TTCATTAAAA AGCGTCTTTA CCAGGCGGGT ATTGCCAGTG TGGAAATTGA ACGGGCGGCC
AATCGCATTA AAGTAATTGT AAATACTGCA AAACCGGGGA TTGTTATCGG CCGGGGTGGC
GCCGAAGTTG AAGCTCTCCG CAAAGACCTG GAACGGTTAA CCGGCAAGCA GGTAAATCTA
AATATCGCTG AGATCAAAAA ACCGGAACTC AATGCCCAGC TGGTAGCCGA GAATGTCGCT
GCCCAATTAG AAAAGCGCAT TGCCTTCCGG CGGGCCATGA AACAGGCCGT AGGCCGGGCC
ATGCGCCTGG GCGCTCAGGG CATCAAGATT GCCTGCGGTG GCCGCCTGGC CGGAGCTGAG
ATCGCCCGGA CGGAATGGTA TAGTGAGGGT AAAGTTCCCC TCCATACCCT CCGGGCTGAT
ATTGACTACG GCTTTGCCGA GGCCAATACA ACCTATGGTA AAATTGGCGT TAAGGTTTGG
ATATATAAAG GTGAAGTCCT GCCCGAGCGG GCACGGGTTC GGGAAGGGGG CAGTAAATAA
 
Protein sequence
MGQKVHPKGL RLGIIRDWDS RWYAGKEYKT LLHEDLKIRE FIKKRLYQAG IASVEIERAA 
NRIKVIVNTA KPGIVIGRGG AEVEALRKDL ERLTGKQVNL NIAEIKKPEL NAQLVAENVA
AQLEKRIAFR RAMKQAVGRA MRLGAQGIKI ACGGRLAGAE IARTEWYSEG KVPLHTLRAD
IDYGFAEANT TYGKIGVKVW IYKGEVLPER ARVREGGSK