Gene Moth_2322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_2322 
Symbol 
ID3831074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp2443089 
End bp2444288 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content62% 
IMG OID637830246 
Productsecretion protein HlyD 
Protein accessionYP_431152 
Protein GI83591143 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000756014 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATGT GGGGGAAAAG GGTGGTAGCC CTTTTGCTTG TAGGTGTTCT GGCCCTGGGT 
GTCGCCGGTT GCGGCGCCAG GGCCGGGGCC AGCGACCAGG TGACTGTTAA GGCTGTCGCC
GCCAGCAAGG GGAAGATGGC GGCGACGGTA GAGGTAACCG GCGCCCTGGT GCCGGCCCGG
ACGGCCAATG TGGTCAGCAA ACTGTCCGGT CAGGTGACGG CCGTGAAAGC TGATGTCGGC
GACCGGGTGC GGGCCGGCCA GGTCCTGGTG GAGATTGATA CCAAGGAGCT CCAGGCCCAG
CTCCAGCAGG CCGAGGCTGC CGTTCGCAGT GTCCAGGATC AGGCGGAACA GGCGCGCATC
GGTATGGATT CAGCCCGCGT CGCTATAGCC AATGCCAAGG TCGCATTGGA TGCCGCCCAG
AAGTACTACG ATCGTATTAA AGCCCTGGCA GATGCCGGCG CGGCGTCCCA GAGCCAGCTG
GACGATGCCC AGACCAAGTT GGACCAGGCT AAAAATGGCT ATGAGGCTGC CAACAAACAG
TATGAGGCCG CCCAAAAACA ATATGAAACC GCATCCGGGT CCGGTTTGGC CCAGGCTGAA
GCGGCGGTCA ACATTATTAA AGTAAATATG AGTAATGCCA GCATCACCAG TCCCATCACC
GGTGTTGTCA CCAACCGGAA CATAAATCCC GGTGAAATGG CCGCACCCAC GAGCCCCCAG
CCCCTGCTGA CCATCGCCGA TACTTCCACC CTGAAGCTCC AGGGGACAGT CGGCCAGGAG
GCAGTCCCCC TGCTGTCAAC GGGACAGAAG GTGACAGTCA CCCTGGACGC CCTGCCGGGC
CGGGAGTTTA CCGGCACGGT GACCCAGGTG GGCCCGGTGG CGGCTACCAC CGGCCAGCGT
TTCCCGGTGG AGATCAGCCT GCCCAACCCG GGCGAGCTGA AGGCCGGCAT GACGGCCCGG
GCCGTATTTA AGCTGGCGGC CCCGGAGGGC GTCGTTGTAC CCCTTGCTGC TGTTCGCACG
GACAACGGCC AGGATTATGT CTTTGTGGTT AAGAACGGCA CGGTAGAGCG GCGGCAGGTT
GTTCTGGGCC TGAAAAACGA TGAACAGGTG ATGATACTTA AGGGGCTGCA GGCCGGCGAG
CAGGTGGCCG TGACCAACGT AGGCGTGCTG CAGGATAAGA TGGCAGTGAC AGTGGAGTAA
 
Protein sequence
MPMWGKRVVA LLLVGVLALG VAGCGARAGA SDQVTVKAVA ASKGKMAATV EVTGALVPAR 
TANVVSKLSG QVTAVKADVG DRVRAGQVLV EIDTKELQAQ LQQAEAAVRS VQDQAEQARI
GMDSARVAIA NAKVALDAAQ KYYDRIKALA DAGAASQSQL DDAQTKLDQA KNGYEAANKQ
YEAAQKQYET ASGSGLAQAE AAVNIIKVNM SNASITSPIT GVVTNRNINP GEMAAPTSPQ
PLLTIADTST LKLQGTVGQE AVPLLSTGQK VTVTLDALPG REFTGTVTQV GPVAATTGQR
FPVEISLPNP GELKAGMTAR AVFKLAAPEG VVVPLAAVRT DNGQDYVFVV KNGTVERRQV
VLGLKNDEQV MILKGLQAGE QVAVTNVGVL QDKMAVTVE