Gene Moth_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_1947 
Symbol 
ID3832297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp2021483 
End bp2022139 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID637829878 
ProductL-serine ammonia-lyase 
Protein accessionYP_430788 
Protein GI83590779 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.376252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000222078 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATGCCT TTCAAATCAT CGGCCCGGTA ATGATCGGGC CTTCCAGTTC CCATACCGCC 
GGGGCGGTGC GTATCGGCCG CCTGGCCCGG GCCATCCTGG GCGAACAGCC CTTGCGGGCC
GAGATCCTTC TCCACGGCTC CTTCGCCCGC ACTGTCCGCG GCCACGGCAC CGATCGGGCC
CTGGTAGCCG GGCTCCTAAG TTTCGATGTT GCCGACGAAA GGGTCAGGGA AGCCCTGGAG
CTGGCTCCCC GGGAGGGGCT GGAGGTCACC TTCGGCGAGA AAGATCTGGG TGACGTCCAT
CCCAACTCCG TACAGTTAAA CCTGGAGGGC CGGGAAGGGA AAGTCCAGGT GGAGGCCTCC
TCCCTGGGTG GGGCCCAGGT AGTAGTTAAT AAGATTGATG CCTTTGAGGT GGAAATATAC
GGGGACCTGC CGACCCTGGT GGCAGCCTAT CCCGACCGGC CGGGGGTAAT AGCGGCGGTG
GCCGCTTTGC TGGCCGGGGT GGGAGTAAAT ATTGCCGGCA TGCGAGTATC CCGCCGGGAA
GCAGGTGAAC AGGCCCTGAT GGTCGTCGAA ACCGACCAGG CAATTCCTCC GGGGCTGGTG
CCGGCCATGC GGGCCCTACC AATGATGGAG CGGGTGATCC AGATTGACCC GGTATAA
 
Protein sequence
MDAFQIIGPV MIGPSSSHTA GAVRIGRLAR AILGEQPLRA EILLHGSFAR TVRGHGTDRA 
LVAGLLSFDV ADERVREALE LAPREGLEVT FGEKDLGDVH PNSVQLNLEG REGKVQVEAS
SLGGAQVVVN KIDAFEVEIY GDLPTLVAAY PDRPGVIAAV AALLAGVGVN IAGMRVSRRE
AGEQALMVVE TDQAIPPGLV PAMRALPMME RVIQIDPV