| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Moth_1938 |
|---|
| Symbol | aksA |
|---|
| ID | 3832430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Moorella thermoacetica ATCC 39073 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007644 |
|---|
| Strand | - |
|---|
| Start bp | 2012878 |
|---|
| End bp | 2014029 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637829869 |
|---|
| Product | trans-homoaconitate synthase |
|---|
| Protein accession | YP_430779 |
|---|
| Protein GI | 83590770 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00360416 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000147263 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGAC AGATTAAAAT CGTCGATACC ACCCTCCGGG ACGGCGAACA AACAGCCGGG
GTGGTCTTTG CCAACAGTGA AAAACTGCGC ATTGCCAAGA TGCTGGACGC TATCGGTGTC
GATCAAATTG AAGCCGGCGT ACCGGTCATG GGCGGTGATG AGAAAAAGGT CATCAAGGAG
ATTGTCGATG CCGGTTTGCG GGCGAGTATC ATGGGCTGGA ACCGGGCTGT CATTGACGAT
GTCCGGCATT CCATCGATTG TGGCTGCGAT GCCGTAGCCA TCTCCATTTC TACTTCTGAT
ATCCATATCG AACACAAACT GCGCAGCACC AGGGAAAAGG TCATTGAGTC CATGTCCCGG
GCCTGCGAGT TCGCCAAGAA GCACAACCTC TACGTCTCCG TCAATGCCGA GGACGCCAGC
CGCACCGATC CCGATTACCT ATTACAGTTT GCTCGGGCTG CCCGGGAGGC CGGCGCCGAC
CGCCTGCGCT TCTGCGATAC GGTGGGCATA ATGGATCCCT TCGGCACTTA TGAAAAAATA
AAATGGTTGA TCGAAGAAGT GGGCCTGGAT GTAGAGATGC ACATGCACAA CGACTTTGGC
ATGGCAACGG CCAATACCCT GGCCGGCATC CGCGCCGGGG CCAAGTACGC CGGGGTGACG
GTGGTGGGCC TGGGCGAACG GGCCGGCAAC GCCGCCCTGG AGGAAGTGGT CATGGCCTTA
AAATATCTGG AAAATATTGA CTTAAAGTTT AAAACCGAGC AGTTCCGCGA GCTGGCCGAG
TACGTTTCCC TGGCGGCACG CCGGCAACTA CCGGCCTGGA AAGCCGTTGT GGGCAGCAAT
ATGTTTGCCC ACGAGTCCGG TATTCATGCC GACGGCGCCC TGAAGGACCC GCGCACCTAC
GAAGTAATGA CGCCGGAAGA GGTCGGCCTG GAACGGCAGA TTGTCATCGG CAAGCACTCG
GGCACGGCGG CCATTAAGGC CAAGTTTGCC GAGTACGGCG TGCACCTGGA AGAAGCAGAC
GCCGCAGCTA TCCTCGCCAG GGTGCGTGCC CTGGCGGTGG AACTCAAGCG CCCCCTCTTT
GATAAGGAAC TGGCCCACAT CTATGAGGAT TACCAGGAAG CCCGGAAAAA GGCGGCCGTG
ACCGCCGTAT AG
|
|---|
| Protein sequence | MGGQIKIVDT TLRDGEQTAG VVFANSEKLR IAKMLDAIGV DQIEAGVPVM GGDEKKVIKE
IVDAGLRASI MGWNRAVIDD VRHSIDCGCD AVAISISTSD IHIEHKLRST REKVIESMSR
ACEFAKKHNL YVSVNAEDAS RTDPDYLLQF ARAAREAGAD RLRFCDTVGI MDPFGTYEKI
KWLIEEVGLD VEMHMHNDFG MATANTLAGI RAGAKYAGVT VVGLGERAGN AALEEVVMAL
KYLENIDLKF KTEQFRELAE YVSLAARRQL PAWKAVVGSN MFAHESGIHA DGALKDPRTY
EVMTPEEVGL ERQIVIGKHS GTAAIKAKFA EYGVHLEEAD AAAILARVRA LAVELKRPLF
DKELAHIYED YQEARKKAAV TAV
|
|---|
| |