Gene Moth_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_1872 
SymboldnaE 
ID3831503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp1933856 
End bp1937326 
Gene Length3471 bp 
Protein Length1156 aa 
Translation table11 
GC content62% 
IMG OID637829804 
ProductDNA polymerase III DnaE 
Protein accessionYP_430715 
Protein GI83590706 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTT TCGTCCACCT CCATGTCCAC AGTGAATACA GCCTCCTGGA TGGAGCCGGC 
CGCATCAAGG ATCTGGTCCG GGCCGCCGGG GAAATGGGTA TGCCCGCCCT GGCCCTCACG
GATCACGGCG TCATGTACGG CGCCGTGGAG TTCTATAAAG CGGCCCGGGA ACAAGGCATC
AAGCCCATTA TCGGCTGCGA GGTTTATGTG GCTCCCCGCT CCCGCCACGA CCGGGAGCCC
CACCGGGATG ATTACCAGTA CCACCTGGTC CTCCTGGCCA CCGACGCCAC GGGTTACCGC
AACCTCACGG CCCTGGTCTC GGCTGCCTTC CTGGAAGGTT TCTATTACAA GCCCCGGGTG
GACCGGGAGC TTTTGAGCCG CCACAGCCAG GGTCTCATAG CCCTGAGCGC CTGCCTGGCT
GGGGAAGTGC CAGCCCACCT TTTAAAGAAC CGGGAAGATG CGGCCTATGA GGCGGCTACC
TGGCTGCGGG AGGTCTTTGG CCCGGAGAAT TTTTACCTGG AACTCCAGGA CCAGGGCCTG
CCGGAACAGC GGCAGCTCAA CCGCCGGCTG GTAGACCTGG CAGCCAGATT AAAAATTCCC
CTGGTCGCCA CCAATGACGT CCACTACATT CGCCAGGACC AGGCCCGGGC CCATGACGTC
CTCCTCTGTA TCCAGACAGG CAAGACCCTG GACGATCCTA ACCGCCTGCG TTTTCCCACG
GCCCAGTTTT ATTTAAAATC TCCTGCCGAG ATGGACAACC TCTTCCGGGA GGTACCCTCA
GCCCTGGCCA ACACCCTGGC CATCGCCGAG CGCTGCCATT TCGACTTCAC CTTCGGCCGG
TTACACCTGC CGGCCTACCA GGTGCCGGCA GGAGAGGACG CAGCCAGTTA TCTCCGCCGC
CTGAGTTACG AGGGCCTTAA ACGGCGTTAC CCCCATGACG ATGGAACGGC CCGGCAGCGC
CTGGAGTACG AGCTGGGTAT AATCGAGCAA ATGGGCTATC CGGGCTATTT CTTGATAGTT
TGGGATATGG TCAATTTCGC CCGCCGGCGG GGGATCCCGG TGGGGCCGGG TCGGGGTTCG
GCCGCCGGCA GCCTGGTGGC CTACTGCCTG GGGATAACCT CCATTGATCC CCTGCGCTAC
AACCTCCTCT TTGAACGTTT TTTAAACCCC GAACGGGTCA GTATGCCGGA CATCGACATG
GACTTCTGCT TCGAACGGCG GGATGAAGTC ATCCAGTATG TCCTGGAGAA GTACGGCCGT
GACCATGTGG CCCAGATCAT TACCTTCGGT ACCATGGCCG CCCGGGCGGC CGTCCGGGAT
GTGGGCCGTG TCCTGGGTTT GCCCCTGGGT GAGGTGGACA GGATCGCCAA GATGGTGCCC
ATGGAGCTGG GTATTACCCT GGAGAGGGCC CTGGCCACCA GCCCGGATTT AAAAGAGAGC
TACGAAGGCA ACCGGGAGGT GCGGGAACTC CTGGATACGG CCCGGGCCAT CGAGGGTATG
CCCCGCCATG CCTCCATCCA TGCCGCGGGG ATTGTCATCA CCCGGGAGCC TTTAATTCAT
TATCTGCCCC TGCAAAAGAC AGGGGATGCC GTTACCACCC AGTACCCCAT GCAGGCTGTG
GAGGAATTGG GGCTATTGAA GATGGACCTG CTGGGCCTCC GCACCCTGAC GGTTATCGGC
CACGCCCGGG AGGCCATCCG GCGCAACCAT GGCCGGGAAC TGGACCTGGA AAGCCTGCCC
CTGGATGACC GGCCAACCTA CCAGCTTCTG GCCAGCGGTG AAACCAGCGG CATCTTCCAG
CTAGAAAGTA GCGGCATGCG GGCCATCCTG AAAGAACTCA AGCCGGAGCG CTTTGAAGAT
ATCATCGCCC TGGTGGCCCT CTACCGGCCC GGGCCACTGG GAAGCGGTAT GGTCGAAGAT
TTTATTAAGC GCAAACACGG GGTTACCCCC ATCAGTTACC TGCACCCGGC CCTGGAACCG
ATACTCAAAG ACACCTACGG GGTTATCCTC TACCAGGAGC AGGTCATGCG CATTGCCAGC
GAGTTGGCCG GTTTTACCCT GGGCCAGGCC GACCTCCTGC GCCGGGCCAT GGGGAAAAAG
AAGCCCGAGG TCCTGGCGGC CCAGCGGGAT CGCTTCCTGG CCGGGGCAGA GGCCAAGGCT
ATACCCCGGG ATGTCGCGCA GAAAATTTTT GAGCTGATGG AATACTTCGC CGGCTACGGC
TTCAATGCCA GCCATTCGGC GGCCTACGCC CTGGTAGCCT ATCAGACGGC CTACCTGAAG
GCCCATTACC CGGCCGAGCT TATGGGCGCC CTTCTTTCCA GCGTGGCCGA GCACCTGGAC
AAGATGGAGC CCTACCTGGC TGAGTGCCAG CGCCTGGGGA TCGCCGTCCT GCCGCCGGAT
GTCAATGAAT CAGGGGTCGA TTTCACCGTC ACTGGGAGGC AGATCCGCTT TGGCCTGGCG
GCCGTTAAAA ACGCTGGCCG GGCCGCCGCC CTGGCCATTA TTGCCGCCCG GGAAGCAGGC
GGTCCCTTTA CCTCCCTCCT GGACTTCTGC CGGCGGGTGG ACAGCCGCCA GGCCAATAAA
AGGGTGGTGG AGAGCCTCAT CCGCTGCGGC GCCTTTAATT CTATCAACCC CAACCGCCGC
CAGCTCCTGG CCGGCCTGGA CGAGTGCCTG GAAGTGGCCG CCAGGCGTCA GGAAGACCGC
CGCAGCGGCC AGGTTTCCCT CATGGACCTG GTGCCTGAAG AGGTTAACGA TCCCCCCCTG
CCCCAGGTAA CCGACTTCTC CCGGGCCGAT ATACTGGCCA TGGAAAAGGA ACTCCTGGGC
TTTTACCTGA GCGGCCATCC CCTGGAACCC TATGCTCCGG TATTAAAAAA GCTGACCTCC
CATTCCCTGG CCGATCTGGC GGAGATAGCC GATGGCAGCC AGGTTACCAT CGGCGGCCTG
GTCAGCGGCC TGCGCCGGCT GGTAACCCGT AAGGGTGATC CCATGGCCGT TCTCACCCTG
GAGGATTTCA GCGGTCAGGT AGAAGCTGTC CTCTTTCCCC GGATGTACAG CCAGGTACGT
TCCTGGCTCG CTCCCGACCG GGCCGTCCTG GTCCAGGGGC AGGTCGATAA ACAGGAAGAA
GGGGTCCAGG TCCTGGCCAA CCTGGTCCGG CCCCTGGCGC CGGAGGCCGG CGGGGGAGAC
CGGACCCTCC CTCCTCCGGC AGGGACCCAC GGGACATTAC CGGAGGCCCG GCAGGGTGGG
GGACGTCTCT ACCTCAAGCT ATCTAGTGAG GGACAGCTAA CAGCCCTGAG GGATACTTTA
GCCGCCCACC CGGGTCCCTG TCAGGTATAT CTCTATCTGG CCGACAGCCG TAGGACTATC
GCCTTACACA GGCGTTATTG GATAGAACCG GTGCCGGAGT TGATGGCAAG TTTGGCCGGG
CTTTTAGGCG GGTATGATAA AATTAAGCTG GTGCAGGAAA ATAGAATTTA A
 
Protein sequence
MKSFVHLHVH SEYSLLDGAG RIKDLVRAAG EMGMPALALT DHGVMYGAVE FYKAAREQGI 
KPIIGCEVYV APRSRHDREP HRDDYQYHLV LLATDATGYR NLTALVSAAF LEGFYYKPRV
DRELLSRHSQ GLIALSACLA GEVPAHLLKN REDAAYEAAT WLREVFGPEN FYLELQDQGL
PEQRQLNRRL VDLAARLKIP LVATNDVHYI RQDQARAHDV LLCIQTGKTL DDPNRLRFPT
AQFYLKSPAE MDNLFREVPS ALANTLAIAE RCHFDFTFGR LHLPAYQVPA GEDAASYLRR
LSYEGLKRRY PHDDGTARQR LEYELGIIEQ MGYPGYFLIV WDMVNFARRR GIPVGPGRGS
AAGSLVAYCL GITSIDPLRY NLLFERFLNP ERVSMPDIDM DFCFERRDEV IQYVLEKYGR
DHVAQIITFG TMAARAAVRD VGRVLGLPLG EVDRIAKMVP MELGITLERA LATSPDLKES
YEGNREVREL LDTARAIEGM PRHASIHAAG IVITREPLIH YLPLQKTGDA VTTQYPMQAV
EELGLLKMDL LGLRTLTVIG HAREAIRRNH GRELDLESLP LDDRPTYQLL ASGETSGIFQ
LESSGMRAIL KELKPERFED IIALVALYRP GPLGSGMVED FIKRKHGVTP ISYLHPALEP
ILKDTYGVIL YQEQVMRIAS ELAGFTLGQA DLLRRAMGKK KPEVLAAQRD RFLAGAEAKA
IPRDVAQKIF ELMEYFAGYG FNASHSAAYA LVAYQTAYLK AHYPAELMGA LLSSVAEHLD
KMEPYLAECQ RLGIAVLPPD VNESGVDFTV TGRQIRFGLA AVKNAGRAAA LAIIAAREAG
GPFTSLLDFC RRVDSRQANK RVVESLIRCG AFNSINPNRR QLLAGLDECL EVAARRQEDR
RSGQVSLMDL VPEEVNDPPL PQVTDFSRAD ILAMEKELLG FYLSGHPLEP YAPVLKKLTS
HSLADLAEIA DGSQVTIGGL VSGLRRLVTR KGDPMAVLTL EDFSGQVEAV LFPRMYSQVR
SWLAPDRAVL VQGQVDKQEE GVQVLANLVR PLAPEAGGGD RTLPPPAGTH GTLPEARQGG
GRLYLKLSSE GQLTALRDTL AAHPGPCQVY LYLADSRRTI ALHRRYWIEP VPELMASLAG
LLGGYDKIKL VQENRI