| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Moth_1556 |
|---|
| Symbol | |
|---|
| ID | 3832189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Moorella thermoacetica ATCC 39073 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007644 |
|---|
| Strand | - |
|---|
| Start bp | 1599500 |
|---|
| End bp | 1600021 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637829488 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_430408 |
|---|
| Protein GI | 83590399 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.367363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGGA ACATCGTCCT GATCGGTTTT ATGGGCAGCG GTAAGACGAC CGTCGGCCGG
CTCCTGGCCC GGGATCTGGG GTGGAGCTTC CTGGACACCG ATACCATGGT TGAGGAACGC
TTGGGCCTGC CCGTAAAAGA GATCTTTGCC CGGGAAGGGG AGGAGTTTTT CCGGGAAGTA
GAAAAAGAAG CCGTCGCCCG GGTGGCGACC GCCCGGCAGG CAGTTATTGC CACCGGCGGG
GGGGCGGTCC TTTGCGGGGT CAACGTCAAG TTGCTGCGGG AGGGCAACAA GGTCGTCTGG
CTTCAGGTGC GGCCGGAGAC GGCCCTCAAA CGGGCCGGGC TGGACGACAG CCGTCCCCTA
CTCCAGGGGC GGGAACCACG GGACATCGCC GCCCTCCTCC GGCGCCGGGA GCCCTATTAT
GCCTTCGCTG ATATCTATAT CGATACCGAC GGTAAGGAGG CGGCCGCCGT GGCGCGGGAA
ATAAAGGAGG CTTTAAAGGC GTGGCTGGAG AGCTTAACGT AG
|
|---|
| Protein sequence | MPGNIVLIGF MGSGKTTVGR LLARDLGWSF LDTDTMVEER LGLPVKEIFA REGEEFFREV
EKEAVARVAT ARQAVIATGG GAVLCGVNVK LLREGNKVVW LQVRPETALK RAGLDDSRPL
LQGREPRDIA ALLRRREPYY AFADIYIDTD GKEAAAVARE IKEALKAWLE SLT
|
|---|
| |