Gene Moth_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_1496 
Symbol 
ID3831723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp1542563 
End bp1543375 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID637829428 
Productsigma 28 (flagella/sporulation) 
Protein accessionYP_430348 
Protein GI83590339 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02885] RNA polymerase sigma-F factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT CGGAAATGAA TCTCCCCCGC TTTCCCCTCC TGTCCGAAGC CGAGACGGAT 
GAGTTGTTGC GCCGGGCCAA GGCAGGGGAT AAGGAGGCCC GGGAGCGGCT GATTAACTGT
AACCTGAAGC TCGTTTTTAA TCTGGTGCAA CGCTTCGAGA AACGTAACTA CGAGCTGGAA
GATCTCTTCC AGATCGGAAC CATCGGGCTC ATCAAGGCCA TTGATAAGTT TGACTTAAGC
TATAAGGTGC GGTTTTCCAC TTATGCCGTA CCCATGATCC TGGGGGAAAT TCGGCGCTTT
TTGCGGGATG ACAGCGCCGT CAAGGTCAGT CGCTCCTTAA AGGAAACGGC CTTTAAAGTC
AACCGCACCC GGGAGGAACT GGCCAAGAAA TTCGGCCGGG AACCGGCCAT CGGCGAGATA
GCCGAGGCCC TGGACCTCTC CCGGGAGGAG ATTATAGCCG CCCTGGAAGC CGTGCAGATG
CCTAGTTCCA TCCACGACAC CGTCTACCAG GACGACGGCG ATCCCATCTA CGTTCTCGAC
CAGCTGGCCT CCGAAGACGG GGAGGAACCG GAGTGGCTGG ATAAGATTGC CCTGAAGGAG
GTCCTGCGCC AGTTGCCGGA AAAACACCGA CGGGTGCTGG TCCTGCGTTT CTTCCAGGAT
AAAACCCAGG CGGAAGTGGC GGCCCGAATG GGGCTCTCCC AGGTACAGAT CTCCCGCATT
GAGCGCCAGG CCCTGCAAAG AATTAGGGAA CTGCTCCAGG CGGAAGGGAG CTGGGATGGG
GACAGCGTAC CGCTGCCCGG GTGCCGGGAG TAA
 
Protein sequence
MRLSEMNLPR FPLLSEAETD ELLRRAKAGD KEARERLINC NLKLVFNLVQ RFEKRNYELE 
DLFQIGTIGL IKAIDKFDLS YKVRFSTYAV PMILGEIRRF LRDDSAVKVS RSLKETAFKV
NRTREELAKK FGREPAIGEI AEALDLSREE IIAALEAVQM PSSIHDTVYQ DDGDPIYVLD
QLASEDGEEP EWLDKIALKE VLRQLPEKHR RVLVLRFFQD KTQAEVAARM GLSQVQISRI
ERQALQRIRE LLQAEGSWDG DSVPLPGCRE