Gene Moth_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_0794 
Symbol 
ID3832125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp827817 
End bp828584 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content61% 
IMG OID637828725 
Productsigma 28 (flagella/sporulation) 
Protein accessionYP_429655 
Protein GI83589646 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0420105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA AGGACAGCAC CCTGTGGACT AGCTATATGG CCGGGCGGGA TGCCCTCCGG 
CGCCAGGAAC TGGTTCTGAA ATACCTGCCC CTGGTGAAAT ATCACGTCAA CCGCCTGGCG
GTGAAGCCAC CCCCGCACCT GGACCAGGAA GACCTGTTGG GCTACGGTAT TGTCGGCCTC
CTGGAAGCTG TGGACCGTTA CGATCCCTCT CGAGGCGTTA ATTTCGAGAC TTTTGCCTCC
CAGCGCATTC GCGGTGCAAT CCTCGATGCC TTGCGCCGCG CCCACTGGGC GCCCCGGAGC
TTGATTGAAA AGTTGCGTCG GGCGAGCCAG GTATACCGCC AGCTGGAACA AGAACAAGGT
GGTGAGGTGT CCGATGGAGC AGTGGCCCGG GCCCTGGGGA TAACCGAGGC TGAGCTCCGG
GAGCTCATGG AGAGGGGCTC CCAGATGGCC ATCCTCTCCC TGGAGGACTT TCTCCTCGAC
CAGGAGGGGG AAGAGGGGAC CACCAGGGGC GAACTACTGG CCGATCCCGG CAGCCCCGAC
CCGGTGGGTA TCTACGAGCA GGGTGAACTT CGCCGCGCCC TGGCGGCCGC CCTGGAAAAC
CTGAAGGAGA AAGACCGCCT TGTACTAACC CTTTACTACT ACGAGGGCTT GACCTTGAAA
GAAATCGGCA AAGTGCTGGG TATTTCGGAA TCCAGAGTTT GCCAGCTCCA TGGCCGGGCG
ATTTTAAATC TGCGCCGGCA GCTGGCGGAC TTTATCATCA ACGGGTGA
 
Protein sequence
MAVKDSTLWT SYMAGRDALR RQELVLKYLP LVKYHVNRLA VKPPPHLDQE DLLGYGIVGL 
LEAVDRYDPS RGVNFETFAS QRIRGAILDA LRRAHWAPRS LIEKLRRASQ VYRQLEQEQG
GEVSDGAVAR ALGITEAELR ELMERGSQMA ILSLEDFLLD QEGEEGTTRG ELLADPGSPD
PVGIYEQGEL RRALAAALEN LKEKDRLVLT LYYYEGLTLK EIGKVLGISE SRVCQLHGRA
ILNLRRQLAD FIING