Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3688 |
Symbol | |
ID | 3837144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 4235114 |
End bp | 4235815 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637827812 |
Product | ABC transporter component |
Protein accession | YP_428769 |
Protein GI | 83595017 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.296687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCAGA CCATCGTCTT CACCGGCGTG CGGGTCGAGG CCGAGGACGG CCGGCCGATC CTGCACGATC TGACCCTGAC CCTGAAGGAA GCCCGGGTCG GGATCATCGG CGCCAACGGC GCGGGCAAAA GCACGCTGAT CCGCCTGATC AACGGCCTTG CCAAGCCCGC CGCCGGCACG GTGGAGGTCG ATGGGATGAG TGTCGCCAAA GAGGTGCGGG CGGTGCGGCG CAAGGTCGGC TTCCTGTTCC AGCACCCCGA CGCCCAGATC GTCATGCCGA CCCCGGCCGA GGACATCGCC TTTGGCCTCA AGGGCCTGAA GCTCGACAAG GCCGAGGTCG CCCGCCGGGT GGCCGCCGCC CTGGCCCGCT TCGGTCTGGC CGGCTTTGAC GACCGCCCGG CCTATATGCT CTCGGGCGGC GAGAAGCAGC GCCTCGCCCT GGCCGGGGTG ATGGCGCTTG ATCCCGAGAT CCTGGTGATG GACGAGCCGA CGACCATGCT TGATCTCGCC GGTCGCAGGA TGTTCGCCCG CCTGGTCGCC GGACTGGCGC AGCGGGTGGT GCTGGCCACC CACGACCTCG ACCTGCTGGC CGCCTATGAC CGGGTGCTGG TCATCGATGG CGGCCGGATC GTCCATGACG GCCCGCCGGC CCAGGCCCGC GCCTTCTATG AAACCCTGAT CAGCGCGCGG GACGGCGGAT GA
|
Protein sequence | MTQTIVFTGV RVEAEDGRPI LHDLTLTLKE ARVGIIGANG AGKSTLIRLI NGLAKPAAGT VEVDGMSVAK EVRAVRRKVG FLFQHPDAQI VMPTPAEDIA FGLKGLKLDK AEVARRVAAA LARFGLAGFD DRPAYMLSGG EKQRLALAGV MALDPEILVM DEPTTMLDLA GRRMFARLVA GLAQRVVLAT HDLDLLAAYD RVLVIDGGRI VHDGPPAQAR AFYETLISAR DGG
|
| |