| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3678 |
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| Symbol | |
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| ID | 3837134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 4225525 |
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| End bp | 4226520 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637827802 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_428759 |
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| Protein GI | 83595007 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTT CCGTATTTAT GGGACTGATT CTGGGGGGGG TGATGATCGC CGGGGGCGCT
CAGGCCGCCG ATGAACCGAT CGTCATTAAA TTCAGCCATG TCGTGGCGCC CGATACCCCC
AAGGGCAAGG CCGCCGAGAT GTTCAAGAAG CTGGCCGAGG AAGGCACGGC CGGCCGCGTC
AAGGTCGAGG TCTATCCCAA CTCGCAGCTT TACAAGGACA AAGAGGAACT CGAAGCCCTC
CAGCTTGGCG CCGTGCAGAT GCTGGCGCCG TCCCTGGCCA AATTCGGGCC GCTGGGCGTC
AAGGAATTCG AGGTTTTCGA CCTGCCCTAC ATCTTCCCGA CCAAGGACGT GCTGCGCGCC
GTCACCGACG GGCCGATCGG CGCCTCGCTG CTCAAGAAGC TGGAAGGCCG CGGCATCAAA
GGCTTGGCCT ATTGGGATAA CGGCTTCAAG ATTTTCAGCG CCAACAAGCC GCTGCTCAAG
CCCGACGACC TCAAGGGCGT GAAGATGCGC ATCCAGTCAT CGAAGGTGCT CGATGCCGAA
ATGCGCGCGC TGGGCGCCCT GCCGCAGGTG ATGGCCTTCT CGGAAGTCTA TCAGGCCCTG
CAGACCGGCG TTGTCGACGG CACCGAAAAC CCGCCGTCGA ACATGTATAC CCAGAAGATG
CACGAAGTGC AGAAGCATGC CACGCTGACC AATCACGGCT ATCTGGGCTA TGCGGTCATC
GTGAACAAGA AGTTCTGGGA AGGCCTGCCC GCCGATATCC GCGCACCGCT GGAAACGGCG
ATGGCGGACT CCACCAAGTT CGCCAATGCC ATCGCCCAGC AGGAAAACGA CGATTCGCTC
GCGGCGATGA AGGCTTCGGG CAAGACCGAA TTCCACATGC CCTCCGAGGA TGAACTGAAG
GCCTGGCAAG ACGCCCTGCT GCCCGTTCAC AAGGAGATGG AAGGCCGCGT CGGCAAGGAT
CTGATCGAGT CGATTTACGC CGTTTCCAAG CAGTAG
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| Protein sequence | MKLSVFMGLI LGGVMIAGGA QAADEPIVIK FSHVVAPDTP KGKAAEMFKK LAEEGTAGRV
KVEVYPNSQL YKDKEELEAL QLGAVQMLAP SLAKFGPLGV KEFEVFDLPY IFPTKDVLRA
VTDGPIGASL LKKLEGRGIK GLAYWDNGFK IFSANKPLLK PDDLKGVKMR IQSSKVLDAE
MRALGALPQV MAFSEVYQAL QTGVVDGTEN PPSNMYTQKM HEVQKHATLT NHGYLGYAVI
VNKKFWEGLP ADIRAPLETA MADSTKFANA IAQQENDDSL AAMKASGKTE FHMPSEDELK
AWQDALLPVH KEMEGRVGKD LIESIYAVSK Q
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