| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3677 |
|---|
| Symbol | |
|---|
| ID | 3837133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 4224670 |
|---|
| End bp | 4225395 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637827801 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_428758 |
|---|
| Protein GI | 83595006 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGTCC TCGACCACCT CGAGGAGGCG CTCATCGCCT TCCTCATGGC CGCCGCGACG
TTGATCATCT TCGTCGCCGT GGTCCATCGC TACGCCTCCG GCGTGGCTTT CCTTTACCCC
TACGTCGGCC ATCTGCATTT CGCCTGGGCC CAGGAACTCT GCATCATCTT GTTCGTCTGG
ATGGCGAAAT TCGGCGCGGC CTATGGCGTG CGCACCGGCA TCCACGTTGG CGTCGACGTC
GTCATCAACC GCCTGAAACC CCGGGCGCGC GGCGTGTTCA TCGTTTTCGG CCTGTTGGCC
GGGGCGGCGT TCACCGGCTG CGTCGCCGTG CTGGGCGGCT CGTTCGTTTG GGATAACGGC
GCCCATTACG CCTTCGTCAC CGCCCTGGGG CTGGAGATCG GCGACCTTTA CGAAGGGCCG
ATCACCGCCG ACCTCGAGTG GCCGACCTGG ATCGTCTACA GCGCCATTCC GCTGGGATCG
TCCTTGATGT GCTTTCGCTT CCTGCAGGTC TGCGTCGGCT TCCTGCGCAC GGGCGAGTTG
CCCCACCACG ACCATGGCCA TGTGGAGGGC CTGGACGAGG ACAAGACCGA TGCCCAGCGC
GCCGCCCAGG ACATCAACTG GTTCACCATG AACGACGGCC TCCATCCCAA GGACATCGCC
CACGACGACG ACACCGGGGA CAAGCCAGAT GATGGCACCG GAACCGGCAA GGGAGACGGC
CGATGA
|
|---|
| Protein sequence | MKVLDHLEEA LIAFLMAAAT LIIFVAVVHR YASGVAFLYP YVGHLHFAWA QELCIILFVW
MAKFGAAYGV RTGIHVGVDV VINRLKPRAR GVFIVFGLLA GAAFTGCVAV LGGSFVWDNG
AHYAFVTALG LEIGDLYEGP ITADLEWPTW IVYSAIPLGS SLMCFRFLQV CVGFLRTGEL
PHHDHGHVEG LDEDKTDAQR AAQDINWFTM NDGLHPKDIA HDDDTGDKPD DGTGTGKGDG
R
|
|---|
| |