Gene Rru_A3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3673 
Symbol 
ID3837129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp4220927 
End bp4222057 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content63% 
IMG OID637827797 
Productglutaconyl-CoA decarboxylase 
Protein accessionYP_428754 
Protein GI83595002 
COG category[C] Energy production and conversion 
COG ID[COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 
TIGRFAM ID[TIGR01109] sodium ion-translocating decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.523011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGACC AACTGATCGC CTTCGCCCAG GCGCTGGAAT CCCAGACGGG CCTCTCGCAT 
TTCTGGTGGG GCAACGCGGT GATGATCGCC ATCGGCGCGA CGATGATCTA TCTGGCGGTG 
TCGAAGAAAT ACGAGCCGCT GTTGCTGGTC GGCATCGGTT TTTCGTGCAT CATCGCCAAT 
GTGCCGGGCT CGGATCTGAT CTTGCCGGGC GGCTTGTTCA ACTACGCCTA TCAGGGGGTG 
GCGCTGCTGA TCATCCCGCC GCTGATCTTC TTTGGCGTCG GCGCCATGAC CGATTTCGGC 
CCGATGATCG CCAACCCCAA GCTGGTGATC CTGGGGGCGG CGGCCCATCT GGGGATCTTC 
GTCGCCCTGA TCCTGGCCAA GCTGCTGGGC TTCACCCTGG CCGAGGCCGG GGCGATCGGC 
ATCATCGGCG GGGCCGACGG ACCGATGGCG ATCTTCGTGA CGATGAAACT GGCCCCCCAT 
CTGCTGCCGC AGGTGTCGGT GGCGGCCTAT TCCTATATGG CGCTGATGCC GCTGATCCAG 
CCGCCGGTGA TGCGCCTGCT GACCACGCGC AAGGAACGGC TGATCACCAT GCGCCAGTCG 
CGGCCGGTCA GCCGCCTGGA AAAGATCGCC TTTCCCATCG TCATCGGTAT CGTCGTCAAT 
CTGTTCCTGC CGCCGGTGGC GCCGCTGATC ACCATGCTGA TGCTGGGCAA TCTGTTCCGC 
GAGGTGCTGG TGGTCGACCG ACTGGTCAAG ACGGCGGCCA ATGATCTGAT GAACGTCATC 
ATCATCATCC TGACCGTCGC CATCGGCTCG ACGATGAACG CCGACAGCTT CCTGACCATT 
CAGACGGTGC AGATCGTCGT GCTCGGACTG GTCGCCTTCA TCTTCGGCAC CGCCTCGGGG 
GTGATCGGGG CGAAGATCAT GAACCTGTTC CTCAAGGAAA AGATCAATCC GCTGCTCGGG 
TCGGCGGGCA TCGCCTCGGT GCCGATCGCC GCCCGCGTCT CCCATATCGT CGCCCTGCGC 
GAGAACCCGA CCAACTATCT GATCTATCAC GCCATGGGTC CCAATCTGGC CGGCGTCTTC 
GGCACCGCCA TCTCGGGCGG CATCATGCTG GCGCTGATCG GGGTCAAATA A
 
Protein sequence
MLDQLIAFAQ ALESQTGLSH FWWGNAVMIA IGATMIYLAV SKKYEPLLLV GIGFSCIIAN 
VPGSDLILPG GLFNYAYQGV ALLIIPPLIF FGVGAMTDFG PMIANPKLVI LGAAAHLGIF 
VALILAKLLG FTLAEAGAIG IIGGADGPMA IFVTMKLAPH LLPQVSVAAY SYMALMPLIQ 
PPVMRLLTTR KERLITMRQS RPVSRLEKIA FPIVIGIVVN LFLPPVAPLI TMLMLGNLFR 
EVLVVDRLVK TAANDLMNVI IIILTVAIGS TMNADSFLTI QTVQIVVLGL VAFIFGTASG 
VIGAKIMNLF LKEKINPLLG SAGIASVPIA ARVSHIVALR ENPTNYLIYH AMGPNLAGVF 
GTAISGGIML ALIGVK