Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3671 |
Symbol | |
ID | 3837127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 4217807 |
End bp | 4220368 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637827795 |
Product | bifunctional preprotein translocase subunit SecD/SecF |
Protein accession | YP_428752 |
Protein GI | 83595000 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF [TIGR01129] protein-export membrane protein SecD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0862684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGTATT TTTCCAAAGC CAAGACGATC GCGATCATCG CGGTCTGTCT GATCGGCCTT CTGCTTGCCC TGCCCAACGC CTTCAAGCAC GGCTCGCTGC CCGACTGGTT GCCGCAGAAC CGCATCACCC TGGGCCTCGA CCTCCAGGGC GGCTCGCATC TGCTGCTTGC CGTCGATATG CCGGCGGTCA TCCACGACCG ACTGGAAACC ATGCTTGAAA GCGTGCGCAC CAATCTGCGC AAGGACTCGC TGCGCTATAC CGGTCTGGCG GTGCGCGACC GCTCGGTGGT TTTCACCCTG GCCTCGGCTG ACGACATCGA AACCGCGCGC GGCGCCCTGG CGCCGCTGGT CCAGCCCGAC GAGCCGGGCA AGCCGGCCGA TTACGGCCTG ACCTTCGATG GCCTGACCGG GCGCATCGCC CTGGCCGATT CGGGCGTTCA GGCCTGGGCC GACAAGGCCG CCCAACAGTC GATCGAAATC GTCCGCCGCC GCATCGACGA GACCGGCGTC AACGAGCCGA TGATCGCCCG CCAGGGCGCC GACCGCATCC TGGTCCAGCT TCCCGGCGTT TCCGATCCCG GCCGCATCAA GCGCCTGCTC GGCCAGACCG CCAAGATGAC CTTCCATATG GTCGGCGACC GGGCCTTGGG CGATGGCAGC GTTCCCGCCG GCTACCGGCT GCTGCCCTCG GCCGATCCCG CCCGTCCGGG CGAAAAGATC CTGGTGTCGC GCAAGGTCGA GGTCGACGGC AGTCATCTGA CCGACGCCAA GCCCAGCTTC GACCAGCAGA ACGGCCAGTG GGTGGTCAGC TTCTCCTTCG ACGGCCAGGG CGCCCGCCGC TTCGCCGATG TCACCAAGAT GGCCGTCGGC AAGCCCTTCG CCATCGTGCT TGACGACAAG GTGGTCAGCG CCCCGGTCAT CCGCGAGCCG ATCACCGGCG GACGCGGGCA GATTTCGGGC AGCTTCACCG CCGCCAGCGC CAATGATCTG GCGGTGCTGC TGCGCGCCGG CGCCCTGCCG GCCCCCCTGA CCGTGGTCGA GGAACGCACC GTCGGCCCCG ATCTCGGCGC CGATTCGATC CGCGCCGGCA TGATCGCCAT CAGCGTCGGC TTCGTGCTGG TGGTCGCCTA TATGGGCATC TTCTACGGCC TGTTCGGCTG GTTCGCCAAT GTCGCCCTGG TCTTCAATCT GGCGATCACC CTTGGCGCCT TGTCGTTGAT GCAGGCCACC TTGACCCTGC CCGGCATCGC CGGCCTGCTG CTGTCGCTGG GCATGGCGGT CGATGCCAAT ATCCTGATCA ACGAGCGCAT CCGCGAAGAG GCCAAAAAGG GGCGGGGCGT CGCCGCGTCG ATGGAAACCG GCTTCAAGCG CGCCTTCGCC ACCATCTTCG ATTCCAACAT CACCACCCTG ATCAAGATGG CGATCTTGTT CTCGATCGGC GTCGGCACCA TCCGCGGCTT CGCCGTGACC ATCTCGCTGG GCATCATCGT CAGCATGTTC ACCGCGATCA CCGTCACCCG CTTGCTGATG GTGATCTGGT TCCGCCGCAC CAAGCCCAAG AGCCTGCCGA TGGCCAACCA TTTCCGGCTG GTTCCCGATC ACACCAAGAT CGCCTTCATG CGCGGCCGCC TGCTTGGGCT GGGCGGATCG GTGGTGCTGT CGGTCGCCTC GGTGGTGCTG TTCTTCCACC CCGGCCTGAA TTACGGCGTC GATTTCGCCG GCGGCACGGT GATGGAGGTG CGCTCGCAGA ACGCCGTCGA TTTCCCGGCC TTGCGCACCG ATCTTCAGTC GCTGCCGATC GGCCCGGTCC AGCTTCAGGC TTTTGGCTCG CCCAATGACG TGCTGATCCG CCTGGAACGC CAGGAAGGCG GCGACGCCGC CCAGGCCGAG GTGGTCAAGC AGGTCCAGGG CATGCTGGAG CGCGACTATG CCGGCAGCGA GATCCGCCGG GTCGACAGCG TCGGCGCCTC GGTCTCGGCC GAGTTGTTCC AAGACGGCAT GATGGCCCTT GGTTTGGCCG CCATCGCCAT GCTGATCTAT ATCTGGTTCC GCTTCGAATG GCAGTTCGGC GTCGGCGCCG TGGTCACCAT GCTGCTCGAC GTGACCAAGA CGGTGGGCTT CTTCGCCATC ACCGGCATGC AGTTCAACCT AACGGCCATC GCCGCCATCC TGACCATCAT GGGCTATTCG ATCAACGACA AGGTCGTGGT CTATGACCGG GTGCGCGAGA ACCTGCGGCT GTACCGCACC ATGCCCCTGC GGCAGTTGAT CGACAAATCG ATCAATGAAA CCCTGGGACG GACGGTGGGC ACCTCGCTTG CCACCTTCCT CGCCATCATC CCGCTGGCCG TCTTCGGCGG CGAGGCCCTG CGCGAATTCG CCCTGGTGCT GCTGTTTGGC GTGGTGCTGG CGACCAGTTC GTCGGTGTTC ATCGCCGCGC CGCTGCTTCT GCTGCTGGGC GAGCACCGGC TGCGTCCGGG GCTGTCGGCC AAGGCGCTGG CCAAGACCGA GGGCGAGACC GAGACCGATG ACACCGGCGA GGCGCCGACC CCGGCGCGGT GA
|
Protein sequence | MLYFSKAKTI AIIAVCLIGL LLALPNAFKH GSLPDWLPQN RITLGLDLQG GSHLLLAVDM PAVIHDRLET MLESVRTNLR KDSLRYTGLA VRDRSVVFTL ASADDIETAR GALAPLVQPD EPGKPADYGL TFDGLTGRIA LADSGVQAWA DKAAQQSIEI VRRRIDETGV NEPMIARQGA DRILVQLPGV SDPGRIKRLL GQTAKMTFHM VGDRALGDGS VPAGYRLLPS ADPARPGEKI LVSRKVEVDG SHLTDAKPSF DQQNGQWVVS FSFDGQGARR FADVTKMAVG KPFAIVLDDK VVSAPVIREP ITGGRGQISG SFTAASANDL AVLLRAGALP APLTVVEERT VGPDLGADSI RAGMIAISVG FVLVVAYMGI FYGLFGWFAN VALVFNLAIT LGALSLMQAT LTLPGIAGLL LSLGMAVDAN ILINERIREE AKKGRGVAAS METGFKRAFA TIFDSNITTL IKMAILFSIG VGTIRGFAVT ISLGIIVSMF TAITVTRLLM VIWFRRTKPK SLPMANHFRL VPDHTKIAFM RGRLLGLGGS VVLSVASVVL FFHPGLNYGV DFAGGTVMEV RSQNAVDFPA LRTDLQSLPI GPVQLQAFGS PNDVLIRLER QEGGDAAQAE VVKQVQGMLE RDYAGSEIRR VDSVGASVSA ELFQDGMMAL GLAAIAMLIY IWFRFEWQFG VGAVVTMLLD VTKTVGFFAI TGMQFNLTAI AAILTIMGYS INDKVVVYDR VRENLRLYRT MPLRQLIDKS INETLGRTVG TSLATFLAII PLAVFGGEAL REFALVLLFG VVLATSSSVF IAAPLLLLLG EHRLRPGLSA KALAKTEGET ETDDTGEAPT PAR
|
| |