| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3663 |
|---|
| Symbol | |
|---|
| ID | 3837119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 4204911 |
|---|
| End bp | 4209788 |
|---|
| Gene Length | 4878 bp |
|---|
| Protein Length | 1625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637827787 |
|---|
| Product | glutamate dehydrogenase (NAD) |
|---|
| Protein accession | YP_428744 |
|---|
| Protein GI | 83594992 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGC AGGGCGACGC TCGGAAGGAC GATTTGATTG ACAAGGTGGT CGCTCTGGCG
AACGACAGGC TGGACCCGGC CGCCGCAGAA CCGGCGGCGC GCTTCATCCG CCTCTATCTC
GCCAACGTCC CCCCCGACGA CCTGCTTCCC CGCCCGGCCG AAGTGCTCTA CGCCCAGGCG
CTGTCGCTGT GGGCCTTCGC CCGCCGGCGA ACCATCGGCC GGCCCAAGGT GCGCGTTTTC
AATCCGACGC TGGAAGAACA TGGCTGGCGC TGCGACCATA CGGTGGTCGA GGTCATCAAT
GACGACATGC CCTTTTTGGT TGATTCCCTG ACCGCCGAGC TGGGACGTCT CGATCTCGGC
GTTCGTCTGG CCATCCACCC GATCATGCGC TTCGTGCGCG ACGAGGACGG CCTATTGTCC
GATGTCGGCC CGATGACCCA TCCGACCGGC CTTGCCGAAT CGGTGATGCA TATCGAGGTG
ACCGAGCAAT CCGATCCGGC CCGCCTGACC AGGGCCGCCC AGGGGGCCGA AGCGGTGCTG
GCGGCGGTGC GGGCGGCGGT GGAAGACTGG CTGGCGATGC GCGAGACCTG CCGGACGATC
GCCGGCGCGT TGGAGACCCT GCCCGTCGGT GACCAGCAGA TGGCGCAAGA CCTGGGCGAG
GCGCGGGATT TCCTGCGTTG GCTGCAAGAC GACCATTTCA CCTTCCTCGG CTATCGCACC
TATGCCTTCC CCCCCGGCCA GTCCACCGGG GTGGCCGTTC CCGAGCCGGG GCTTGGCATC
TTGCGCTCAC CCGAGGCCAA GGCCTTTGGC GAATTGCGCA ATCTCGCCAG CTTGCCCGAG
GAGGTGCGGG CCTTCGTCGA CCAGCGTACG ACGCTGATCA TCACCAAAAG CAGCGAACGC
GCCCGCGTCC ACCGGCCGGT GGCGATGGAC GCCATCGGCA TCAAGGATTT CGACGAGGAG
GGAACGCGGG TGATCGGCCT GCGGCTGTTC GTCGGCCTGT TCACCGCCGA TGTCTACACC
AGTTCCCCCT CGGTCGTGCC GATGCTGCGC ACCAAGATCG AGCGGGTGGT CGGTCGCTCC
GCCCTGCCGT CGCATAGTCA CGACGGCAAG AAGCTGATGA ACATCCTGGA GAACCTGCCG
CGCGACGAGT TGTTCCAGAT GAGCGAGGAT CAGCTTCTGG CCACCGCGCT GGGCATCTTG
CATCTGCAAG AACGTCAGCG CACCGCCCTG TTCCTGCGCC AGGACGAGTT CCAGCGCTTC
ATCTCGTGTC TGGTCTTCGT GCCGCGCGAT CGCCACGACA CGGCGCTGCG GCTGGCCATT
CAGGATATCC TCGAACGCGC CCTGAACGGC AGGGTCGACT CGTTCTCCAC CCTGGTTTCC
GACGCGCCGC TGGCGCGCAT TCATTTCATC GTCGGCACCA CCCCGGGCCA GTTGCCCCAG
TATGAATCGA GCGAAATCGA GCGGCGGGTG GCCGAGGCGG CGCGCAGTTG GTCGGACCAC
CTGCACGACG CCCTGGTCGC CGCGCGCGGC GAGGAAACCG GGCTGCGCCA GTTCACCCGC
TATGCCAAGG CCTTCCCCGC CGGCTACCGC GAGCGGGTGA CCGCCGTTCA GGCCGTGGGC
GATATCGCCC GCATCGACGA GGCCCTGGGC GAGAGCGGCT TCGCCATGAC GCTCTACCGT
TCGATCGAGG ACGCCGACCA CGAGGTGCGC TTCAAGGTCT TCACTCCGGG CAAGGCGCTG
CCCTTGTCGG ACGTGCTGCC GATGCTTGAG AACATGGGCT TCAAGGTCAT GGGCGAGGTG
CCCTTCAAGG TCCGCCCCCA GGGTGAGAGC GGACCCCAGG CGGCGTGGGT CCATGATTTC
CTGATGACGC TACGCGGCGG CGGCGGGCTG GACATCGGCA AGGTCCGCCA GTCGTTCCAA
GACAGCTTCG CCCGGCTGTG GCGCGGCGAC ATCGAGAACG ACGGCTTCAA CAAGCTGGTG
GTTCTGGCCG GCCTGACCTG GCGTCAGGTG GTGATCTTGC GCGCCTATTC GCGCTTCCTG
CGTCAGGCCG CCTTCCCGTC GAGCCAAGCC GCCATCGAGG AGACGATGGC CGCCCATCCC
GATATCGCCG CCCTGCTTGT CGCCTTGTTC GAGGCCCGCT TCGATCCCGA CAGCCCCAAC
GGCGCGGCGC GGGCGAGCGG CGACGCCACC GTGGACCGCG CACCCGAAGA GGCGAGGATC
GTCGAGGCGA TCCGTCAGGC CCTCGATGGG GTGGACAGCC CCGACGAGGA CCGCATTTTA
CGACGATACC TCAACCTCGT GACCTCGAGC CTGCGCACCA ATCACTACCA GCTTGGCGCC
GACGGGGCCG CCAAGCCCTA TCTGTCGATC AAGCTCGACA GCCGCGCCAT CGATGAGCTG
CCGGCGCCGC GCCCCTGGGT CGAGGTTTTC GTCTATAGTC CGCGCGTCGA GGCCATCCAT
TTGCGCGGCG GCAAGGTGGC GCGCGGCGGC ATCCGCTGGT CGGACCGCCG CGAGGATTTC
CGCACCGAGG TCCTGGGGCT GATGAAGGCC CAGATGGTCA AGAACGCGGT GATCGTTCCC
GTTGGCTCCA AGGGCGGCTT CGTCGTCAAG AAGCCGCCGG TCGACGCCGG CCGCGAGGCC
CTGCTGGCCG AGGGCATCGC CTGCTATAAG ATCCTGATGG CCGGGCTGCT TGACCTGACC
GACAATCTGG ATGGCGACCA CGTGGTGCCG CCGCCCCGCG TCGTCCGCCA CGATGGCGAC
GATCCCTATC TGGTGGTCGC CGCCGACAAG GGAACCGCCA CCTTCTCCGA TATCGCCAAT
GGCGTTTCGG CCGATTACGG CTTCTGGCTG TCTGACGCCT TCGCCTCGGG CGGCTCCAAC
GGCTATGACC ACAAGGCCAT GGGCATCACG GCGCGCGGCG CCTGGGAGGC GGTCAAGCGC
CACTTCCGCG AACAGGGCCG CGACATCCAA AGCGAGCCAA CGACGGTGAT CGGCGTTGGC
GACATGAGCG GCGATGTGTT CGGCAACGCC TTGCAGCTTT CCCCCGCCCT GCGCCTGATC
GGCGCCTTCA ACCATCAGCA CATCTTCGTC GATCCGGCGC CCGATCCGGC GGTCGCCTTC
GCCGAACGCG AGCGGCTGTT CCGCCTGCCG CGCTCGGCCT GGAGCGATTA CGACGCGAGC
AAGCTTTCCG CCGGCGGGGC GATCTATGAG CGCCGGGCCA AGCAGATCAC CCTGACCCCG
GAAATCCGCG CCCTCTTCGG CTTCACCCGC GATCGGGTGA CGCCGACCGA ACTGATCCGC
GCCCTGCTGA CCGCCGAGGT CGATCTTTTG TGGTTCGGCG GCATCGGCAC CTACATCAAG
GCGCGCGGCG AGACCGATAT CCAGGTCGGC GACCGCGCCA ATGACGCGCT GCGCGTCGAT
GGCGCCGATA TCCGGGCCAA AGTGGTGGGA GAAGGCGCCA ATCTGGGCGT CACCCAGCGC
GGGCGCATCG AATACGCCCT GAAAGGCGGG CGAATCAACA CCGACGCCAT CGATAATTCG
GCCGGGGTCG ATTGCTCCGA TCACGAGGTC AATATCAAGA TCCTGCTCGA CGGCGTGCTA
CGCGCCGGCG ATATGACGGC CAAGCAACGC AACGCCCTGC TCGGCGCCAT GACCGACGAC
GTCGCCGCCC TGGTGCTGCG CCACAACACC TTGCAGACCC AGGCGATCAG CCTGACCGTC
GCCCAAGACA GCGAGGTGCT TGATCACCAG GGCCGCTTCA TGCGCCTGCT CGAGCGGGCC
GGCCGCCTGG ACCGCGCCCT GGAATTCCTG CCCGACGACG ACACCCTGGC CGAACGCGCC
GCCCAGGGGC GCGGCCTGAC CCGGCCCGAG GTGGCGGTGC TGATGCCCTA TGCCAAGCTG
TGGCTGTTTG ACGAGATCGT CGACAGCGAC CTGCCCGACG ATCCCGCCCT TCAGGGCGAT
CTGGTGCGCT ACTTCCCCGC CGTCCTCGGC GAACGCTTCC CCGAGGCCCT GCAGAACCAC
CGCCTGAAAC GCGAGATCAT CGCCACCGTC GCCACCAATT CGATGATCAA TCGCGTTGGC
GGCACCTTCG TCACCCAGAT GATCGAGCGC ACCGGCATGA ACCCGTCGGA TGTGGCGCGG
GCCTATATCG TCACCCGCGA CGCCTATGGC CTGCGCGGCC TGTGGGCGGC GATCGAGGCG
CTTGATGGCA AAGTGCCGGC GGCCGTTCAG CTGACCCTGC TCAAGGACAT CAACCGGCTG
ATCGCCCATT CGACGCTGTG GCTGCTGCGC AATGGCGTCT GGCCGCTCGA TCTGGCCGCC
GCCGGGGCGC CTTTGGCCGA AGCCGCCGGC GTGCTGGCCG ACCATTTGCC CGATATCCTG
GCCGAGGATC AGCGTCCGAT CGCCGATCAG CGCATCGCCA CCCTGGTCGA AGCCGGGGTT
CCGATCGCCC TCGCCCGCGT CGTCGCCGGG GTCGATGGTC TGGCCGCGGC CAATGATATC
GCCCGCATCG CCAGCTTGCG GTCCTTGCCG ATCGACCGGG TCGCCGCCCT TTATTTCCGC
GTCGGCGCCG AATTCGGCAT GGCCTGGATG CGCGGCAAGG CCGAAGAGCT CGACCACGGC
AGCCACTGGA CCAAGCTCGC GGTTTCGGCC ATCGTGGAGG ACCTGTTCGT CCAGCAACGC
CATCTGGCCC TGGCCGCCCT GGATTGCTCC GGCGAGGTCG ATGATCCGGC CGGGGCGGTG
GCCTGCTGGA AGGGCACCAA TCCCAAGGTG GTCGAGCGCA CCGCCCAGCT TCTGTCTGAA
CTGCGGGGCG CGCCGAGTGT TGATCTGGCG ATGTTGACCG TGGCCGCGCG GCAATTCCGC
GCCCTTTCCG GACTATGA
|
|---|
| Protein sequence | MDQQGDARKD DLIDKVVALA NDRLDPAAAE PAARFIRLYL ANVPPDDLLP RPAEVLYAQA
LSLWAFARRR TIGRPKVRVF NPTLEEHGWR CDHTVVEVIN DDMPFLVDSL TAELGRLDLG
VRLAIHPIMR FVRDEDGLLS DVGPMTHPTG LAESVMHIEV TEQSDPARLT RAAQGAEAVL
AAVRAAVEDW LAMRETCRTI AGALETLPVG DQQMAQDLGE ARDFLRWLQD DHFTFLGYRT
YAFPPGQSTG VAVPEPGLGI LRSPEAKAFG ELRNLASLPE EVRAFVDQRT TLIITKSSER
ARVHRPVAMD AIGIKDFDEE GTRVIGLRLF VGLFTADVYT SSPSVVPMLR TKIERVVGRS
ALPSHSHDGK KLMNILENLP RDELFQMSED QLLATALGIL HLQERQRTAL FLRQDEFQRF
ISCLVFVPRD RHDTALRLAI QDILERALNG RVDSFSTLVS DAPLARIHFI VGTTPGQLPQ
YESSEIERRV AEAARSWSDH LHDALVAARG EETGLRQFTR YAKAFPAGYR ERVTAVQAVG
DIARIDEALG ESGFAMTLYR SIEDADHEVR FKVFTPGKAL PLSDVLPMLE NMGFKVMGEV
PFKVRPQGES GPQAAWVHDF LMTLRGGGGL DIGKVRQSFQ DSFARLWRGD IENDGFNKLV
VLAGLTWRQV VILRAYSRFL RQAAFPSSQA AIEETMAAHP DIAALLVALF EARFDPDSPN
GAARASGDAT VDRAPEEARI VEAIRQALDG VDSPDEDRIL RRYLNLVTSS LRTNHYQLGA
DGAAKPYLSI KLDSRAIDEL PAPRPWVEVF VYSPRVEAIH LRGGKVARGG IRWSDRREDF
RTEVLGLMKA QMVKNAVIVP VGSKGGFVVK KPPVDAGREA LLAEGIACYK ILMAGLLDLT
DNLDGDHVVP PPRVVRHDGD DPYLVVAADK GTATFSDIAN GVSADYGFWL SDAFASGGSN
GYDHKAMGIT ARGAWEAVKR HFREQGRDIQ SEPTTVIGVG DMSGDVFGNA LQLSPALRLI
GAFNHQHIFV DPAPDPAVAF AERERLFRLP RSAWSDYDAS KLSAGGAIYE RRAKQITLTP
EIRALFGFTR DRVTPTELIR ALLTAEVDLL WFGGIGTYIK ARGETDIQVG DRANDALRVD
GADIRAKVVG EGANLGVTQR GRIEYALKGG RINTDAIDNS AGVDCSDHEV NIKILLDGVL
RAGDMTAKQR NALLGAMTDD VAALVLRHNT LQTQAISLTV AQDSEVLDHQ GRFMRLLERA
GRLDRALEFL PDDDTLAERA AQGRGLTRPE VAVLMPYAKL WLFDEIVDSD LPDDPALQGD
LVRYFPAVLG ERFPEALQNH RLKREIIATV ATNSMINRVG GTFVTQMIER TGMNPSDVAR
AYIVTRDAYG LRGLWAAIEA LDGKVPAAVQ LTLLKDINRL IAHSTLWLLR NGVWPLDLAA
AGAPLAEAAG VLADHLPDIL AEDQRPIADQ RIATLVEAGV PIALARVVAG VDGLAAANDI
ARIASLRSLP IDRVAALYFR VGAEFGMAWM RGKAEELDHG SHWTKLAVSA IVEDLFVQQR
HLALAALDCS GEVDDPAGAV ACWKGTNPKV VERTAQLLSE LRGAPSVDLA MLTVAARQFR
ALSGL
|
|---|
| |