Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3643 |
Symbol | |
ID | 3837099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 4184109 |
End bp | 4184774 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637827767 |
Product | GrpE protein |
Protein accession | YP_428724 |
Protein GI | 83594972 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.58693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCAGC ACAACGACAC GCCCGAAAGC CGGACCCCTC AGGACTCGTC CGCTCCCGCC TCTCCCGCCG CCGCCGCCGA TGACACCACC GCGGCGGTCG CCGAGGCGGC CGAGGCGATC GCCCGGGCCG ACCTCGAGGA GCGGATCACC GCCCTGGAAG ACGATAATCG TCGCTTGAAG GAAGAGTATC TGCGCGCCCT GGCCGAGGCT CAGAACGCCA AGCGGATGGC CGACAAGCGC ATCGAGGATA ACAGCCGCTA CGCGGTATCG AACTTCGCCA AGGCCGTTCT TGGCGTCGCC GATAACCTCG GCCGCGCCCT GCTGTCCGTT CCGGAGGAGG CGCGCGGCGG CAACGAGATG GTCAAGAACC TCGCCTTCGG CGTGGAACTG ACGGCCAAGG AACTGGAAAA CGCCCTGGCC CAATATCAAA TCCGCCGGGT CGAGGCGCTG AACGAGGCCT TCGATCCGCA TTTCCATCAG GCGGTGCAGG AAGTCGAAAA CACGGCGGTG CCCAATGCCA CCATCGTCTC GGTGCTGCAG GACGGCTATG TCATCCATGA CCGCCTGCTG CGTCCGGCGA TGGTCGTGGT GTCGCGGGGC GGCCCCAAGC GCGAGCCCAA GCCCGCCGCC GACAGCGCCG ACGGCGGCGT CAACACCACC GTCTAG
|
Protein sequence | MPQHNDTPES RTPQDSSAPA SPAAAADDTT AAVAEAAEAI ARADLEERIT ALEDDNRRLK EEYLRALAEA QNAKRMADKR IEDNSRYAVS NFAKAVLGVA DNLGRALLSV PEEARGGNEM VKNLAFGVEL TAKELENALA QYQIRRVEAL NEAFDPHFHQ AVQEVENTAV PNATIVSVLQ DGYVIHDRLL RPAMVVVSRG GPKREPKPAA DSADGGVNTT V
|
| |