Gene Rru_A3642 details

Gene Information

• Locus tag: Rru_A3642
• Symbol: hrcA
• ID: 3837098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 4183002
• End bp: 4184060
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637827766
• Product: heat-inducible transcription repressor
• Protein accession: YP_428723
• Protein GI: 83594971
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.175788
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGTGA CGGGTCGCGG CGGCATCGTG ACCGAACTGG ATGAGCGCTC CCGCCAGATC 
TTCGGCCAGA TCGTGGAAAC CTATGTGGAA ACCGGCGAGC CGGTCGGCTC GCGCACCTTG 
TCGCGGCGCC TGACGGTGGC CCTGTCGCCC GCCACCATCC GCAATGTCAT GGCCGACCTT 
GAGGACTTGG GGCTGCTTTA TGCCCCCCAT ACCTCGGCCG GGCGCCTGCC CACCGATGCC 
GGGCTGCGCC TGTTCGTCAA CGGCCTGATG GAATTGGGCG GGCTGACCTC GGAAGAGCGC 
CGCCATATCG ATGGCCGGGT TCAGGCCGCC GGCAAGAACC TTGACGACAT GCTGAGCGAC 
GCGACCTCGC TGCTGTCGGG GCTGGCGCGC TGCGCCGGGC TGGTGCTCGC CCCCAAGACC 
GACAGCGCCC TCAAGCACAT CGAATTCGTG CCGCTCGGCC CCGGGCGGGC GATGGTGATC 
ATGATCACCG AAAACGGCCT TGTCGAAAAC CGCGTGCTTG AGGTGCCCCA GGGCCTGCCG 
CCCAGCGCCC TGGCCGAGGC CACCAATTAC CTGAACGCCC GGCTGACCGG ACGCACCCTG 
GAAGAGGCGC GCTCGGAGAT TCAAGAGGAA CTCGACAGCC ATCGCAGCGC CCTGGACGAT 
CTCGCCCAGC GCGTGGTCGA AACCGGCATG GCGACATGGT CGGGGGGGAC GCGCGGCGGC 
GAGCTGATCG TGCGCGGCCA AAGCCATCTT TTGGCCGATG TCACCGCCCT GGAGGATCTG 
GAACGCATCC GCGATCTGTT CGATACCCTG GAAACCAAGG AACAGGTTCT GAGAATCCTT 
GATATGGTCA ATCTGGCCGA GGGCGTTCAG ATCTTTATCG GAGCGGAGAA CGAGTTGTTT 
TCCGTCTCGG GCTGCTCCAT GATCGTCGCC CCTTATCAGA ACAGCCGGGA AGAGATCGTT 
GGCGCCATTG GCGTTATCGG TCCCACCCGC ATCAATTACC GCCGCATCAT TCCCTTGGTG 
GATTACACCT CCAAGGTGAT CAGCCGGATG ATCGGCTGA 

 

Protein sequence

MVVTGRGGIV TELDERSRQI FGQIVETYVE TGEPVGSRTL SRRLTVALSP ATIRNVMADL 
EDLGLLYAPH TSAGRLPTDA GLRLFVNGLM ELGGLTSEER RHIDGRVQAA GKNLDDMLSD 
ATSLLSGLAR CAGLVLAPKT DSALKHIEFV PLGPGRAMVI MITENGLVEN RVLEVPQGLP 
PSALAEATNY LNARLTGRTL EEARSEIQEE LDSHRSALDD LAQRVVETGM ATWSGGTRGG 
ELIVRGQSHL LADVTALEDL ERIRDLFDTL ETKEQVLRIL DMVNLAEGVQ IFIGAENELF 
SVSGCSMIVA PYQNSREEIV GAIGVIGPTR INYRRIIPLV DYTSKVISRM IG