Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3641 |
Symbol | rph |
ID | 3837097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 4182078 |
End bp | 4182800 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637827765 |
Product | ribonuclease PH |
Protein accession | YP_428722 |
Protein GI | 83594970 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCCT CCGGTCGCGC CGTCGACAGC CTGCGCTCCA TCGTTCTCGA GCCGGGCTAT TCCAAGCATG CCGAAGGATC GTGCATGGCC CGCTTCGGCG ATACCCATGT GCTGTGCACC GCCTCGATCG AGGAGCGGGT GCCGGGCTGG ATGCGCGGCG GCGGCAAGGG CTGGGTGACC GCCGAATACG GCATGCTGCC GCGCTCGACC CATACCCGCA CCGACCGCGA GGCGGCGCGC GGGCGCCAAA GCGGCCGCAC CCAGGAAATT CAGCGCCTGA TCGGCCGCTC GCTGCGCTCA GTCACCGACC TGAAAAAGAT CGGCGAAATC CAGATCCGCC TGGATTGCGA TGTCATCCAG GCCGATGGCG GCACCCGCAC CGCCGCCATC ACCGGATCGT GGGTGGCGCT TTATCAGGCG CTGGCGCGCT TCGAGAAGCT GGGCCTTGGC GCCCTGCCGC CGCTGACCGA CCATGTGGCG GCGGTGTCTT GCGGCCTGTG CGATGGCGTG GCCGTGCTCG ATCTTGATTA CGCCGAGGAC AGCACGGCCC AGGCCGATGC CAATTTCGTT TTGACCGGTA CCGGCGGCAT CGTCGAGATC CAGGGCACGG CCGAAACCTC GCCCTTCGCC CAGGCCCAGT TCATGGAGTT GCTGGCCCTG GCGCAAAAAG GCATCACCGA GTTGGTCGCC CTGCAGAAGG CGGCCCTCGC CAGCTTGCGC TAA
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Protein sequence | MRPSGRAVDS LRSIVLEPGY SKHAEGSCMA RFGDTHVLCT ASIEERVPGW MRGGGKGWVT AEYGMLPRST HTRTDREAAR GRQSGRTQEI QRLIGRSLRS VTDLKKIGEI QIRLDCDVIQ ADGGTRTAAI TGSWVALYQA LARFEKLGLG ALPPLTDHVA AVSCGLCDGV AVLDLDYAED STAQADANFV LTGTGGIVEI QGTAETSPFA QAQFMELLAL AQKGITELVA LQKAALASLR
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