| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3629 |
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| Symbol | holA |
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| ID | 3837085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 4169445 |
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| End bp | 4170473 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637827753 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_428710 |
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| Protein GI | 83594958 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.628858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTGA CCGGCCAAGC CATCGACGGC TTCCTGCGCA AGCCCGATCC GAAAATCCGC
TGCGTGCTGG TTTATGGCCC CGACGAGGGG CTGGTGCGCG AGCGGCTGGA GCAGCTGGCG
CGCACGGTGG TCGCCGATCC CAAGGACCCC TTCCGCATCA CCGACCTGTC GGGCGACGAT
CTGCGCGCCG ATCCGGCGCG GCTGGCCGAC GAGGCGGCGG CCCTGGCCTT TGGCGGCGGG
CGGCGGCTGG TGCGTCTGCG TCAGATGACC GACCAGCACG CCCCGCGCCT TAAGGCCTTC
GTCGAAGCCC CGGTTGGCGA GGCCCTGGTG CTGGTCCAGG GCGGCGATCT CACGGCCCGC
TCCGCCCTGC GCAAGCTGTT CGAAGGGGCT AGCGCCGCCG CCGCCCTGCC CTGCTACGCC
GATGAGGGGC GGTCGCTTGA GACCCTGGTG CGCGCCACCC TGGCCGAGGC CCGGCTGGCC
GCCGCCCCCG AGGTGATCGA CTATCTGGTG GCCAATCTGG GCGGCGATCG CGGGGTCAGC
CGCTCGGAAC TGGCCAAGCT GGTGACCTAT TGCGGCAAGG CCACCAGCGT GTCCCTGGAC
GACGCCCTGG CCTGCGTGGG CGATAGCGCC CAGATCGGCC TTGATATGCT GACCAACGCC
GTGGCCGAGG GCGATAGCGC CACCGCCTTG CGCGCCCTTG ACCGCCTGGG TCAGGAAGGC
ATGGCGACGG TCGCCCTTCT GCGGGGCCTG ACCCGCCACT TCACCCGGCT GCATCTGGTC
GCCGGACTGA TCGCCGGGGG AACGAGCGTG GATCAGGCCC TGGCCGCGCT CAAGCCGCCG
GTGATGTTCA AACTGGCCCC GCGATTCCGC AGCCAAGTTC AGCGCTGGTC AGCCGAGCGC
CTTGCCCAGG CCCTGGATCT GTTGCTTGAC GCCGAAATCG ACGCGAAGAG CAGCGGCCTG
CCCGAGCGCG CCCTGGTGGA ACGTCTGTTG CTGCGTCTGG CCCGGGGGGC AAAAACCGCC
AGCCGCTGA
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| Protein sequence | MKLTGQAIDG FLRKPDPKIR CVLVYGPDEG LVRERLEQLA RTVVADPKDP FRITDLSGDD
LRADPARLAD EAAALAFGGG RRLVRLRQMT DQHAPRLKAF VEAPVGEALV LVQGGDLTAR
SALRKLFEGA SAAAALPCYA DEGRSLETLV RATLAEARLA AAPEVIDYLV ANLGGDRGVS
RSELAKLVTY CGKATSVSLD DALACVGDSA QIGLDMLTNA VAEGDSATAL RALDRLGQEG
MATVALLRGL TRHFTRLHLV AGLIAGGTSV DQALAALKPP VMFKLAPRFR SQVQRWSAER
LAQALDLLLD AEIDAKSSGL PERALVERLL LRLARGAKTA SR
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