Gene Rru_A3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3610 
Symbol 
ID3837066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp4149880 
End bp4150362 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID637827734 
Productpreprotein translocase subunit SecB 
Protein accessionYP_428691 
Protein GI83594939 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG AAACCGCTAC CCCGGGTGCC GACCAGGCCC CCCTGATCAT CAACGGCCAG 
TACATCAAGG ATCTGTCCTT CGAGGTGCCC AACGCCCCGC GGATCTTCGC CGAACTCGAC
GGTCAGCCCG AAGTGCCGAT CAATGTCGAT GTCACGGCCA CCCCGGTTGG CGAGCGCTTC
TTCGAAGTCA GCCTCAAATT CCGCATCGAA GGCCGTATCA AGGGCAAGGT GGCCTTCATC
GCCGAGCTTG ATTATTGCGC CGTGGCCACC GTCAACCTGC CCGACGAGCA TATCCATCCG
GTGCTGCTGA TCGAAGTGCC GCGCCTGATG TTCCCCTTCG CCCGCAACAT CCTGGCCGAC
CTCACCCGCG ACGGCGGCTT CCTGCCGTTG ATGATCCAGC CCCTGGATTT CGCCGCCATG
TATCGCAACC GCGTTCAGGC CGCCCAGTCC CAGGCCGCCG CCGAGAACGC CGCGGCAAAC
TGA
 
Protein sequence
MSDETATPGA DQAPLIINGQ YIKDLSFEVP NAPRIFAELD GQPEVPINVD VTATPVGERF 
FEVSLKFRIE GRIKGKVAFI AELDYCAVAT VNLPDEHIHP VLLIEVPRLM FPFARNILAD
LTRDGGFLPL MIQPLDFAAM YRNRVQAAQS QAAAENAAAN