Gene Rru_A3607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3607 
Symbol 
ID3837063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp4147125 
End bp4148321 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content70% 
IMG OID637827731 
Productmurein degrading transglycosylase protein 
Protein accessionYP_428688 
Protein GI83594936 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCGA TGAACGGCAC GTCCGGGCGG CGGCTGTCGA CGGCAACCCG GGTCGCCGCG 
ATGGCCGGGG TTCTGCTGCT GGCGGCCTGC GGCGGTCCGT CGTCGCGTCC GGGCCTGGTC
AGCCGGCCGG CGGGCGTTGC CGGACCGGTC TCCTATCAGC GCGTCGCCAT CGAAGGGCTG
CCCGGCTGGT CGACCGACCG CGTCGCCGAT GCCCTACCGG TGTTCCGGCG GTCGTGCGAG
CGGCTGCGCG CGGTTTCCCC GAATTCCATG GTCGGACCCT CGGTCTGGGG ATCGCGGGCA
AGCGATTGGC AGGCGGCCTG TGCCGTCGCC GCCCGCCTTC CGGCCTTCGA TGACGACGCG
GCCCGGCGGT TCTTCGCCGA GCGCTTCCAG GCTTGGCAGG TGACCGGGGC GGGCGATCCC
ACCGGTTTGT TCACCGGCTA TTACGAAGCC GCCCTTGATG GCTCGCTTTC GCCCAGCGCC
GTCTATTCCA CCCCGATCTA CGGCGTGCCG CTTGATCTAC GCATGGAAGG CGGCAAGGGC
ATGCGGGTAT CGGGGGGGCG CAGTCTGCCC TATCCCGATC GCGCCGCCAT CGAGGAGGGC
GCCATTTCCG GTGTCGCCCC GGTGATCATG TGGGCGCGCG ATCCGGTGGA CGTGTTCATG
CTCCATATCC AGGGCTCGGG ACAGGTCCGC CTGCCCGATG GCCGGATCCA ACGCATCGGC
TATGCCGCCA ACAACGGTCA TCCCTTTGTC GGCATCGGCG CCATCATGCG CGATCGCGGC
CTGGGCGACG GGTCGTCGAT GATCGCCATC CGCGCTTGGT TGCGCGCCAA TCCGGCCGAG
GGCCGCGCCC TGATGCGCGA AAACCCGCGC TTCATCTTTT TCCGCCCGAT CGAGGGCGAA
GGACCGATCG GCGCCCAGGG TCTGCCTTTG ACCGGCGGGC GCAGTCTGGC CGTTGATCCG
TCCAGCGTTC CCTTGGGCGC CCCGGTGTGG CTGGCGACCT CGGATGCCCA CGGCGAAACC
GTCAACCGCC TGATGGTCGC CCAGGATACG GGCAGCGCCA TCAAGGGCGC GGTGCGCGGC
GATTTCTTCT GGGGAAGCGG CGAGGAGGCG CTTTACCACG CCGGCGGCAT GAAGTCGGCC
GGGCGGTACT GGGTGCTTGT CCCGCGCGGC GGGCGCAACG CGGTTGCGCA AAACTAG
 
Protein sequence
MGAMNGTSGR RLSTATRVAA MAGVLLLAAC GGPSSRPGLV SRPAGVAGPV SYQRVAIEGL 
PGWSTDRVAD ALPVFRRSCE RLRAVSPNSM VGPSVWGSRA SDWQAACAVA ARLPAFDDDA
ARRFFAERFQ AWQVTGAGDP TGLFTGYYEA ALDGSLSPSA VYSTPIYGVP LDLRMEGGKG
MRVSGGRSLP YPDRAAIEEG AISGVAPVIM WARDPVDVFM LHIQGSGQVR LPDGRIQRIG
YAANNGHPFV GIGAIMRDRG LGDGSSMIAI RAWLRANPAE GRALMRENPR FIFFRPIEGE
GPIGAQGLPL TGGRSLAVDP SSVPLGAPVW LATSDAHGET VNRLMVAQDT GSAIKGAVRG
DFFWGSGEEA LYHAGGMKSA GRYWVLVPRG GRNAVAQN