| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3571 |
|---|
| Symbol | gpsA |
|---|
| ID | 3837027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 4116028 |
|---|
| End bp | 4117077 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637827695 |
|---|
| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_428652 |
|---|
| Protein GI | 83594900 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.715523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA TCATCGATCA TATCGCCGTC ATCGGCGGCG GCGCCTGGGG CACCGCGCTT
GCCCAGACCT CGCGGCGCGC CGGCCGGCGG GTAACCTTGT GGGCCCGCGA GCCCGAGGTC
GCCCGGGCGA TCAACGCCAC CCACGAGAAC CCGGACTTCC TGCCCGGCGT CAGCCTTGAT
CCCGGCCTTC ACGCCACCGC CGATCTGGCC GAGGCCCTGC GCGGCGCCGA GGCCGTGCTG
GTGGTCTGCC CGGCCCAGGC CCTGCGCCCG GTGCTGACCA CCGCCCGCCC GCTCTGGCCG
GGGCGGGCGC CGATGGTGAT CTGCGCCAAG GGCGTCGAGC AGGGAAGCGG GGCGCGGATG
TCGGAAGTGG CCACCGCCGT TCTTCCCGAA GCACCCCTGG CCGTGCTGTC GGGCCCGACC
TTCGCCCGCG AGGTGGCCGA GGGCCGGCCG ACGGCGGTCA CCCTGGCCTG CGCCGATGGC
GCCCTGGCCG AGGCCCTGGT GTTGGCCCTT GGCACCCGGA CCTTCCGCCC CTATGCCTCG
ACCGATGTGG TCGGCGCCGA AATTGGCGGG GCGGTCAAGA ACGTGCTGGC GATCGCCTGC
GGCGTGGTCG AGGGGCTGGG GTTGGGCGAC AATGCCCGCG CCGCCCTGCT GACCCGGGGG
CTGGCCGAGA TCACCCGCCT GGGCCGGGCC CTTGGCGCGC GGTCGGAAAC CCTGTCGGGG
CTGTCGGGTT TGGGCGATCT GATCCTGACG GCGACCAGCA TGCAGTCGCG CAACTTCTCG
CTGGGCTTCG CCCTTGGTCA GGGGCGGACC CTTGATCAGG TGCTGGGCGA GCGTCGCTCG
GTCGCCGAGG GCGTTCATAC CGCTTCGGCG GTGGTCGCCC TGGCGGCGCG CTGGGCGATC
GAAATGCCGA TCTGCGCGGC CATCCACGGC GTGCTGTCGG GCGATTACGA CGTGACCTCG
GCCATCGAGT CGCTGCTGTC GCGCCCCTTG CGGGTTGAAG GCGGCAGCGA AAGCCAGATC
CACCCCACAG CAAAGACCGC CACGCCCTGA
|
|---|
| Protein sequence | MNQIIDHIAV IGGGAWGTAL AQTSRRAGRR VTLWAREPEV ARAINATHEN PDFLPGVSLD
PGLHATADLA EALRGAEAVL VVCPAQALRP VLTTARPLWP GRAPMVICAK GVEQGSGARM
SEVATAVLPE APLAVLSGPT FAREVAEGRP TAVTLACADG ALAEALVLAL GTRTFRPYAS
TDVVGAEIGG AVKNVLAIAC GVVEGLGLGD NARAALLTRG LAEITRLGRA LGARSETLSG
LSGLGDLILT ATSMQSRNFS LGFALGQGRT LDQVLGERRS VAEGVHTASA VVALAARWAI
EMPICAAIHG VLSGDYDVTS AIESLLSRPL RVEGGSESQI HPTAKTATP
|
|---|
| |