Gene Rru_A3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3540 
Symbol 
ID3836995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp4073211 
End bp4073651 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content65% 
IMG OID637827663 
Producthypothetical protein 
Protein accessionYP_428621 
Protein GI83594869 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCCAT CGCTTTCGGA CGTCGGTCGT GTTCTTGGCT TCGGCGAAGG AGAAAGCCGA 
GCGCTGTCGC AGCTCCATCT GATCACCTTG ATCGAAGAGG GCCTTTCCAT ATCGGCGCTC 
GACCGCGTCT CCCGCTCCGT GGCGCCCGAG GACGCGACTT TCAAATACCG TATCGTCTCG 
CGCGCCAGGC TGGCGCGTCG TCGCAAGCCG GGACAGGACC GGCTTCACGG CGATGAAAGC 
GACCGTCTGG TCCGGCTGGC TCGCGTGTGG ACTTTCGCCA CGGCGGTTTG GGGCGACGAG 
AAGGCCGCCC GCGACTTCTT CTTTCGTCCC CATCCGCTTC TTGATGGTCG CCCCCCCATC 
GACGTCGTTC TTGCCAGCGC CATGGGGGCC GAATTGGTCG GCGACATCCT TGGCCGGCTC 
GCCTATGGCA CCGCCGCGTG A
 
Protein sequence
MPPSLSDVGR VLGFGEGESR ALSQLHLITL IEEGLSISAL DRVSRSVAPE DATFKYRIVS 
RARLARRRKP GQDRLHGDES DRLVRLARVW TFATAVWGDE KAARDFFFRP HPLLDGRPPI 
DVVLASAMGA ELVGDILGRL AYGTAA