| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3530 |
|---|
| Symbol | |
|---|
| ID | 3836985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 4061767 |
|---|
| End bp | 4063032 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637827653 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | YP_428611 |
|---|
| Protein GI | 83594859 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCC TCTGTCGCGA CTGTCTATGC GAGGTGCTGA CACCCAGCGG ATGCTGTCCG
GGCTGCGGAT CGGCGCGGGT GGTTCGCCAT CCCGGGCTCG CCCTTCTGGA TATCGCCCAT
ATCGACTGCG ACGCCTTTTA CGCCTCGGTG GAAAAGCGCG ACAATCCCAG CCTGCGCGAC
CGACCGCTGA TCGTTGGCCA TCCCGGCGGC CGCGGCGTGG CGACGACGGC CTGTTACATC
GCCCGGCGCT TTGGCGCGCG CTCGGCGATG CCGATGTTCA AATGCCTGGA GCTCTGCCCC
GAGGCCGTGG TCATCCCCCC CGATATGGCG AAATACAAGG CCGTCAGCGC CCAGGTGCGG
GCGATCATGC TCGAGGCGAC GCATAGGCTG GAGCCGCTGT CGCTTGACGA GGCCTATCTG
GATCTTTCCG AAGGCGAACA CCGTTTCGCC CGGCCGCCGG CGGTCAGTTT GGCGACGATC
GCCCGCCGGG TCGAGCGCGA GATCGGCATC ACCGTGTCGA TCGGGCTGTC CTCGAACCGT
TTCCTGGCCA AGCTGGCCAG CGACATGAAC AAGCCCCAGG GGTTCACCGT GATCGACGAG
GCCGAGGCCC CGGCCCTGCT GGCGCCGATG CCGGTCAAAC GCCTGCATGG GGTGGGAGCG
GCGACCGAAC GCCGGTTGGC CGAATTGGGC CTGCACACCA TCGGCGATCT TCAGGGCCGG
CCCGAGGCCG ATTTGCTCGC CCGCTTTGGT AAGATCGGCC GGGCGCTGCA CGCCCACGCC
TGGGGGCGGG GCGGCCGGAC GATCAGCCCC GATCGCGAAA CCAAAAGCAT CTCGGCCGAA
ACCACCTTCG AGCGCGATCT GTCGCGCCTG CCCGATCTCG CCCGCGCCCT GGGCCCGTTA
AGCGAGCGCG TGGCCCGCGC CCTGACCCGC AACGCCCTGG CCGGGGCGAC GGTGGTGCTG
AAGCTCAAGA CCCATGACTT CCGCATCCTG ACCCGTCACG CCCGCTTGGG CGACCCGACC
GCCCGGGCCG AGGTGATCGC CGGCGCCGCC CGGCGTTTGC TTGAACGCGA AACCGATGGC
CGGCGCTTTC GCCTAATCGG GGTGGGCATG GCCGACCTGC GCCCGGGCAG CGAGGCCGAT
CCCCCCGATC TATTCGCCCG CTCCCCGCCG ACGGCACGCG ACGCACCGGC CGGCAAGGAG
ACGGGCGATG GCGGGTCGGA AAGCCCTCAG AGGACCGCTT CGACCGCCTC GACCTCGGGA
ATGTAG
|
|---|
| Protein sequence | MTGLCRDCLC EVLTPSGCCP GCGSARVVRH PGLALLDIAH IDCDAFYASV EKRDNPSLRD
RPLIVGHPGG RGVATTACYI ARRFGARSAM PMFKCLELCP EAVVIPPDMA KYKAVSAQVR
AIMLEATHRL EPLSLDEAYL DLSEGEHRFA RPPAVSLATI ARRVEREIGI TVSIGLSSNR
FLAKLASDMN KPQGFTVIDE AEAPALLAPM PVKRLHGVGA ATERRLAELG LHTIGDLQGR
PEADLLARFG KIGRALHAHA WGRGGRTISP DRETKSISAE TTFERDLSRL PDLARALGPL
SERVARALTR NALAGATVVL KLKTHDFRIL TRHARLGDPT ARAEVIAGAA RRLLERETDG
RRFRLIGVGM ADLRPGSEAD PPDLFARSPP TARDAPAGKE TGDGGSESPQ RTASTASTSG
M
|
|---|
| |