Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3500 |
Symbol | |
ID | 3836954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 4028296 |
End bp | 4028931 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637827622 |
Product | cobalt transport protein CbiM |
Protein accession | YP_428581 |
Protein GI | 83594829 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATATCG CCGAGGGGAT CGTCCCGCTC TCCGTGGCGG CGCCGCTGAC GGTCGTCGCC GTCGCCGGCG TCGCCAAGGG CCTGCGCGCC ATCGATGCCG AGCGTCTGCC GACCTGTGGC CTGTTTTCGG CGGTGTTCTT CGTCGCCAGT CTGATCCATG TGCCGCTGGG ACCGACAAGC ACCCATCTCG TGCTCAGCGG GCTGATCGGC CTGATGTTGG GTTGGGCGGC CTTTCCGGCC ATTCTGGTCG GACTGGCCCT GCAGGCGGTG TTCTTCGGCT TCGGCGGCCT TCTGGTGCTT GGCGTCAACA CCCTGACCAT GGCCGCCCCG GCGGTGCTGG CCTGGGCGCT CTTCCGGGGG TTGGCCGATC GGCTGGCGCC GTCGCGGGCG CCGGTGCTGG CGGCGATCTG CGGCGGGCTG GCGGTGCTGG TTTCCGCCCT GCTGGTCGCC GGAGTTTTGG CCCTGTCCGA TCAGGCCTTC CTGCCGGCGG CCGGGTTGGT GGTGCTGGGC AATCTGCCGG TGATCGGCCT GGAATCGCTG ATTACCGGCG CCGCCGTCGC CCTGCTCCAC CGTGTCCGTC CCGAGATGCT TCCGCGACAG GGAGGTCGCC CATGGTCGGG ATCCTTCGTC TCCTGA
|
Protein sequence | MHIAEGIVPL SVAAPLTVVA VAGVAKGLRA IDAERLPTCG LFSAVFFVAS LIHVPLGPTS THLVLSGLIG LMLGWAAFPA ILVGLALQAV FFGFGGLLVL GVNTLTMAAP AVLAWALFRG LADRLAPSRA PVLAAICGGL AVLVSALLVA GVLALSDQAF LPAAGLVVLG NLPVIGLESL ITGAAVALLH RVRPEMLPRQ GGRPWSGSFV S
|
| |