Gene Rru_A3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3498 
Symbol 
ID3836952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp4027043 
End bp4027681 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID637827620 
Productubiquinone biosynthesis protein COQ7 
Protein accessionYP_428579 
Protein GI83594827 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2941] Ubiquinone biosynthesis protein COQ7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00704542 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCGC CGTCCTCGCG CACCCCCCGG GGGTCCACTC CGCCCTTCGA ACCCTCGGCC 
GACGAGCTGG TTCTTCACGC CAGCGGCCGC AAGACCGCCG AGGACCGCCT GCCCGGCGAT 
CCGTCGCCCG CCGCGCTGAT AGACCGCTTC CTGCGCGTCG ATCAGGCCGG CGAGCATGGC 
GCCGTGCGCA TCTACCAGGG GCAATTGGCC GTGCTCGGCC GACGTTCGGC CAATGTCGGG 
GTCTTGCGCC ACATGTTGGC CCAGGAAGAG GTTCACCTCG CCACCTTTGA CAAGCTGGTC 
GCCGACCGCC GGGCCCGCCC GACCCTGCTT GGCCCGCTGT GGCATGTCGC CGGCTTCGCC 
TTGGGGGCGG GAACCGCCCT GCTTGGCGAA AAGGCGGCGA TGGCCTGCAC CACCGCCATC 
GAAGAGGCGA TCGACGGCCA TTACAAAGAT CAATACGACC GCCTGGGCGA TGACGAACTG 
CCGCTGAAGG CCACCATCGA CACCTTCCGC CGCGAGGAAC TGGAACACCG CGATATCGGC 
TATGCCAATG GCGCCCGCCA AGCCCCGGCC TTTCCGGTGC TGAGCGGGGC GATCAAGGCC 
GGAGCCAAGC TGGCGATCTG GGTCTCCGAA CGGGTCTGA
 
Protein sequence
MTSPSSRTPR GSTPPFEPSA DELVLHASGR KTAEDRLPGD PSPAALIDRF LRVDQAGEHG 
AVRIYQGQLA VLGRRSANVG VLRHMLAQEE VHLATFDKLV ADRRARPTLL GPLWHVAGFA 
LGAGTALLGE KAAMACTTAI EEAIDGHYKD QYDRLGDDEL PLKATIDTFR REELEHRDIG 
YANGARQAPA FPVLSGAIKA GAKLAIWVSE RV