Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3487 |
Symbol | thrS |
ID | 3836940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 4012361 |
End bp | 4014292 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637827608 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_428568 |
Protein GI | 83594816 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGCCA TTTCCCTGCC CGACGGCAGC GTTCGCAGCT ATGAAGGCCC GGTGACGGGT CGCCAGATCG CCGAGGACAT TGGTCCCGGC TTGGCCAAGG CAGCGCTGGC GGTCACTATC GACGGGACTA TGAAGGATCT GAGCGTTCCC ATCACTACGG ACGCCAGCGT CAGCCTGATC ACGGCGCGCG ACGCCGCCGC CCTGGAGCTG CTGCGCCACG ACGCCGCCCA TGTGATGGCC CAGGCGGTGC AAGAATTGTA TCCCGGCACC CAGGTGACCA TCGGTCCGGC GATCGAGAAC GGCTTTTATT ACGACTTCGC CCGGGCCGAG CCGTTCACGC CCGAGGATCT GGAGCGCATC GAAGAGCGCA TGCGCGAGAT CGTCGGCCGC GATTTGCCGA TCGTCCGCGA GGTCTGGGAG CGCGACGAGG CCATCGCCTA TTTCACCAAG CTTGGTGAAA CCTATAAGGC CGAGCTGATC ACCGGCCTGC CGGCGAACGA GGATGTCAGC GTCTATCGCC AGGGCGACTG GCTTGACCTG TGCCGCGGCC CCCATCTGCC GTCGACGGGC AAGCTCGGCA CCGCCTTCAA GCTGATGAAG CTGGCCGGCG CCTATTGGCG GGGCGATTCG CGCAATCCGA TGCTTCAGCG CATCTATGGC ACCGCTTGGC CCGATCGCAA GCAGCTTGAC GCCTATCTGA CCATGCTGGC CGAGGCCGAA AAGCGCGACC ACCGCCGCGT CGGCCAGGAA ATGGACCTGT TCCACCTTCA GGAAGAGGCC CAGGGCGCGG TCTTCTGGCA TCCCAAGGGC TGGACGGTCT ATCGCACCTT GCAAAACTAT ATGCGCCGTC GCCTGGATCT GGCCGGCTAC GTCGAGGTCA ACACCCCGAT GCTGGTCGAC CGCGCCCTTT GGGAAAAATC CGGGCATTGG GAGAAATTCC GCCAGAACAT GTTCATCAGC GAGGCCGAGG ACAAGCTGCT GGCGATGAAG CCGATGAACT GCCCCTGCCA TATCCAGATC TTCAAGCAGG GCATCAAAAG CTATCGCGAC CTGCCGCTGC GCATGGCCGA ATTCGGCGCC TGTCACCGCA ACGAGGCCTC GGGCGCCCTG CATGGCCTGA TGCGGGTGCG CGCCTTCGTT CAAGATGACG CCCATATCTT CTGCACCGAA GATCAGATCG TTTCGGAAAC CCAGGCCTTC TGCGATCTTC TGAAAAGCGT CTACCGGGAC CTGGGCTTCA CCGAGATCAA GGTGAAGTTC TCCGACCGCC CCGAGGTTCG CGCCGGCAGC GACGAGACCT GGGACAAGGC CGAAGCCGCC CTGCGCGAAG CCACCGACGC CGCCGGCCTG GAGTGGACCC TCAACCCGGG CGAGGGCGCC TTCTATGGTC CCAAGCTGGA ATTCGTCCTG CGCGACGCCA TCGGCCGCGA CTGGCAGTGC GGCACCTTGC AGGTCGATTT CGTGCTTCCC GAACGCCTGG GCGCCGATTA TGTCGGCGAG GATGGCGACA AGCATCGCCC GGTCATGCTC CACCGCGCCA TCCTTGGCAC CTTCGAGCGC TTCATGGGCA TCCTGATCGA GAACTGCGCC GGCCGTTTCC CCTTCTGGCT GGCGCCGGTG CAGGTCGTGG TCGCGACCAT CACCTCGGAT GCCGACGATT ACGCCCGCAC GGTGCTCGCC GCCCTCAAGG CCAAGGGCTT GCGCGCGGTC GCCGATCTGC GCAATGAAAA AATCAACTAC AAGGTGCGCG AGCATTCGCT GGCCAAGGTG CCGGTCATGC TGGTGGTCGG ACGCAAGGAG GCCGAAACCG GCGGCGTGGC CTTGCGTCGC CTGGGCGGTC AGAGCCAGGA AGTCCTTGCG CTTGATGAAG CCATTGCTAC ACTTGCCAAC GAGTCGGTTG CTCCCGATCT GCGCGCCGCC CCCCAGGGGT AA
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Protein sequence | MVAISLPDGS VRSYEGPVTG RQIAEDIGPG LAKAALAVTI DGTMKDLSVP ITTDASVSLI TARDAAALEL LRHDAAHVMA QAVQELYPGT QVTIGPAIEN GFYYDFARAE PFTPEDLERI EERMREIVGR DLPIVREVWE RDEAIAYFTK LGETYKAELI TGLPANEDVS VYRQGDWLDL CRGPHLPSTG KLGTAFKLMK LAGAYWRGDS RNPMLQRIYG TAWPDRKQLD AYLTMLAEAE KRDHRRVGQE MDLFHLQEEA QGAVFWHPKG WTVYRTLQNY MRRRLDLAGY VEVNTPMLVD RALWEKSGHW EKFRQNMFIS EAEDKLLAMK PMNCPCHIQI FKQGIKSYRD LPLRMAEFGA CHRNEASGAL HGLMRVRAFV QDDAHIFCTE DQIVSETQAF CDLLKSVYRD LGFTEIKVKF SDRPEVRAGS DETWDKAEAA LREATDAAGL EWTLNPGEGA FYGPKLEFVL RDAIGRDWQC GTLQVDFVLP ERLGADYVGE DGDKHRPVML HRAILGTFER FMGILIENCA GRFPFWLAPV QVVVATITSD ADDYARTVLA ALKAKGLRAV ADLRNEKINY KVREHSLAKV PVMLVVGRKE AETGGVALRR LGGQSQEVLA LDEAIATLAN ESVAPDLRAA PQG
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