| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3475 |
|---|
| Symbol | |
|---|
| ID | 3836928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3999485 |
|---|
| End bp | 3999910 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637827596 |
|---|
| Product | cysteine desulfuration protein SufE |
|---|
| Protein accession | YP_428556 |
|---|
| Protein GI | 83594804 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2166] SufE protein probably involved in Fe-S center assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00677521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGACA TGCCGCAGAT GACCCTGGAC GATCTGGCCG AAAATTTCGC CCTGTTCGAC
GATTGGGAAG ACCGCTACCG CTACATCATC GATCTGGGCA AGAAACTGCC GCCGATGCCC
GAAGCGGAAA AGACCGAGGC CTCGAAGGTA CGGGGCTGCA TGAGCCAAGT GTGGCTGGTC
GTCCTCCCCG ATCCCGGCCC GCCCAAGCGG CTAACCTTCC ATGTCGATTC CGACGCCCAC
ATCGTGCGCG GATTGGCGGC GGTGATGATG ATCATCTTTT CGGGCCGCAC CCCGGAAGAA
ATCCTGGCGA TCGACGCCGA CGGCATCTTC GCCCGGCTTG GCCTGGACAG CCACATCAGC
CCCAACCGCC GCAACGGCGT GGCCAGCATG ATCGCCACCA TCCAGGCGAT GGCCCGCGCC
GCATAA
|
|---|
| Protein sequence | MSDMPQMTLD DLAENFALFD DWEDRYRYII DLGKKLPPMP EAEKTEASKV RGCMSQVWLV
VLPDPGPPKR LTFHVDSDAH IVRGLAAVMM IIFSGRTPEE ILAIDADGIF ARLGLDSHIS
PNRRNGVASM IATIQAMARA A
|
|---|
| |