Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3460 |
Symbol | |
ID | 3836912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3983992 |
End bp | 3985926 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637827581 |
Product | cyclic nucleotide-binding domain-containing protein |
Protein accession | YP_428541 |
Protein GI | 83594789 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCG GGTCCAGCAC ATATAGCGAC GGCGCCGTGA TCTTCCGCGA GGGCGACCGG GCCGACAGCG CCTTCTTCAT CGTTGAAGGG GACGTTGCCC TTTACAAGAC GGGCGAGCAC GGCGTGGTGC GGCTGGCGAC GCTGGGCCGT GGCGCGTTCT TTGGCGAATC GGCCATTCTT GACCGGGCGG CGCCCCGCGC GGTGACCGCC ATCGCCCGGG GAGCGGTGAC GCTGAAGCCT TTGGCGCGCG GCGCCCTGCT CAAGCGCATC GCCAATGATC CCCAGGTCGC CCTGAAAATC ATGGCCCGGC TGGCCCAGCG CCTGGGCGAG ATGGAAAGCC GCGTCGCCGG TCTTGGGCAA AGCGAAGCCC TGCCCGCCCC GGCGATCGCC CTGCCCGTTC CCGTGGTCAC CGGCCTGCCC GAGGCGCTTG ACAGCGAGCC CGAGGGGCCG GGAATGATCG GCCGGCTGCT TGGGTTGATG CGCCGGCGCG GCTGGTCGGA GGGGCGCGAC GCCGCCCCCG GCCCGGCCCC GGCCGCTCCC CCGGCCCCGG CCCGGCCCCT GCTGGTCGTC GTCGCCGCCC TGCCCCACGA TAGCGGCGAT GCCCAGCGCG CCGGCGTCGC CGCCTGCTTC CAGAACCTGC CCGGGGTGGT GGTGCGCACG GTCGGCCGGG CGATCGAGGT GGCCGGGGGC GATGGACCGC TGGCCGCCCT GGCCCAGGCT GGTACCCAGG CCCGCCAGAT CGTTCAGCGC GAGGATGCCG ATCTGCTGAT CTGGGGGCTG GTCGACGGTC CGGCCGGCAT CGTCGAATTG CGCTTCACCA ATGCCGCCTT CGTTGAAGAC GAACGCCCCG GCCTGCCGAC GATGATGACC TGGCTTGGCC TGCCGCTGGG GTTCGGTGAG GATTGGGGCC ACCTGCTGCG CGCCGTGGCC CTGGCCTCGC TGGAGCCGCG CACCGAGGCC CACGCCCAGA CCCTGGCTGC GCTTTTGGCG CCAATGGTCG AGGCCGCGCG CGGATTGGGG CTTGATCCGC CGGTCAGCCT GGGGGCGATG GAACAGGCGG CCATTCTCGC CTGCTATGGC AATGCGGCGG CGGCTTTGGG CTATTACACC CGCGATGTCG GCTGGCACAA GGTGGCGGTC GAGGCCTATG GCGGCGCCAT CGGCCTGTTG CCGCGCGAGG CCGATCTGGA ATGGGGCTTG CTGCACCGCT CGATCGGCAT CGTCTTGCAG GCCATCGGCG AGCGCAGCGG CGATCCGGCC TTTCTCGCCC AGGCGATCGA GGCCTATCGG GCGGCGCTGG AAGCGCTGCG CCGTCCCGAT TGTCCGCGCG AATGGGCCAG CGTGCAAAAC CGCCTGGGCT TGATGCTCTA TAAGGTCGAC TTGCTTGAAG GCAAGCTTGA GAGCCTGAAA GAGGCTTTGG GCTGCCTGCA GGCGGCGATG CAGATTTTCG GGCGGAGCGA TTATCCCGCC AAATGGGCCG AGATCATGAA CACCCTGGGG CAGGTTCTGC AGGTCTATGG CGACCATGCC CGCTCGGTCG ATATCCTGGA GCGCGCCGTC GAAGCCTGCC GTCAGGCGCT GGAGGTGCGC ACCTTCGAAG CCGCGCCCTT GCTGTGGGCG GGTGGGCAGA ACAACCTGGG GTCGGCGTTG TTCCTGCTGG CCAAGCATTC CCAGCACCGC GACGTTCTGG AAGCCGCCGC CGAAAGCTTT CGCTCGGCTT TAGGCACCTA TCGCATGCAT GGCATGGACC TGCTGGCCGA AATTCCCGAC AAGAACCTGA AACGGGCCGA AGAGATGCTG CGCCGGATCG GCGGGCCGCG CCCGCTGGTC GATCCGCTGT GGGTCGAGCG TCCGGCGACG GTCGGCGAGG AAGACGACTG GCCCGATAAC GAAACCGAAG GCAAGGGACG GGGCACGGCC TCGCGAAGCG GATGA
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Protein sequence | MKPGSSTYSD GAVIFREGDR ADSAFFIVEG DVALYKTGEH GVVRLATLGR GAFFGESAIL DRAAPRAVTA IARGAVTLKP LARGALLKRI ANDPQVALKI MARLAQRLGE MESRVAGLGQ SEALPAPAIA LPVPVVTGLP EALDSEPEGP GMIGRLLGLM RRRGWSEGRD AAPGPAPAAP PAPARPLLVV VAALPHDSGD AQRAGVAACF QNLPGVVVRT VGRAIEVAGG DGPLAALAQA GTQARQIVQR EDADLLIWGL VDGPAGIVEL RFTNAAFVED ERPGLPTMMT WLGLPLGFGE DWGHLLRAVA LASLEPRTEA HAQTLAALLA PMVEAARGLG LDPPVSLGAM EQAAILACYG NAAAALGYYT RDVGWHKVAV EAYGGAIGLL PREADLEWGL LHRSIGIVLQ AIGERSGDPA FLAQAIEAYR AALEALRRPD CPREWASVQN RLGLMLYKVD LLEGKLESLK EALGCLQAAM QIFGRSDYPA KWAEIMNTLG QVLQVYGDHA RSVDILERAV EACRQALEVR TFEAAPLLWA GGQNNLGSAL FLLAKHSQHR DVLEAAAESF RSALGTYRMH GMDLLAEIPD KNLKRAEEML RRIGGPRPLV DPLWVERPAT VGEEDDWPDN ETEGKGRGTA SRSG
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