Gene Rru_A3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3413 
Symbol 
ID3836865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3929649 
End bp3930350 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID637827534 
ProductABC transporter component 
Protein accessionYP_428494 
Protein GI83594742 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.53532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTC TGGTCGTTGA GGGCATGGCG GCGGGCTATG GCGATGTCGA TATCCTGTCC 
GATATCGCGC TGCGCGTCGA TCCGCTGGAG ATCGTCACCA TCGCCGGCAC CAATGGCGCG
GGCAAGTCGA CCCTGGTCAA GGGGTTGATG GGCCTGCTCA CCCGCATCCG GGGCAAGGTG
GAGTTCGAAG GAACCTCGCT GCTGGGCGTC GCCGCCGAAC GGCGTATCCA CCTGGGTATT
TCCTATGTGC CCCAGGTCAA CAACGTCTTC CCGTCGCTGA CCGTTCTGGA AAACCTTGAA
GTGGTCGAAG GGGTGGGGAA CCGCGCCCGG CAGATCGCCA AGATGATCGA GCGTTTCCCC
GCCCTCGCCG CCCGCCGCGC CACCCGCGCC GGGGCGCTGT CGGGCGGTGA GCGCCAGCAA
CTGGCCTTCG CCCGCGCCCT GATGCCCGCC CCCCGGCTGG TCATCCTCGA TGAACCGACG
GCGGCCCTTT CCCCCGCCCT GGTCACCGGC GTTCTCGAGA CCATTCGCGG CCTGCCGGGG
CTGGGCGTTT CGGTGCTGCT GGTCGAACAG CGCGCCCGTC AGGCCCTGGC GATCAGCGAT
CAGGGCTGCA TCCTTGATAG CGGCAAGGTG GTGATCGCCG ATCGCGCCAG CGCCTTGCTG
GCCGACGAGC GCATGGCCGA ATTGTACCTG GGCGAGCATT GA
 
Protein sequence
MSVLVVEGMA AGYGDVDILS DIALRVDPLE IVTIAGTNGA GKSTLVKGLM GLLTRIRGKV 
EFEGTSLLGV AAERRIHLGI SYVPQVNNVF PSLTVLENLE VVEGVGNRAR QIAKMIERFP
ALAARRATRA GALSGGERQQ LAFARALMPA PRLVILDEPT AALSPALVTG VLETIRGLPG
LGVSVLLVEQ RARQALAISD QGCILDSGKV VIADRASALL ADERMAELYL GEH