Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3413 |
Symbol | |
ID | 3836865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3929649 |
End bp | 3930350 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637827534 |
Product | ABC transporter component |
Protein accession | YP_428494 |
Protein GI | 83594742 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.53532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTTC TGGTCGTTGA GGGCATGGCG GCGGGCTATG GCGATGTCGA TATCCTGTCC GATATCGCGC TGCGCGTCGA TCCGCTGGAG ATCGTCACCA TCGCCGGCAC CAATGGCGCG GGCAAGTCGA CCCTGGTCAA GGGGTTGATG GGCCTGCTCA CCCGCATCCG GGGCAAGGTG GAGTTCGAAG GAACCTCGCT GCTGGGCGTC GCCGCCGAAC GGCGTATCCA CCTGGGTATT TCCTATGTGC CCCAGGTCAA CAACGTCTTC CCGTCGCTGA CCGTTCTGGA AAACCTTGAA GTGGTCGAAG GGGTGGGGAA CCGCGCCCGG CAGATCGCCA AGATGATCGA GCGTTTCCCC GCCCTCGCCG CCCGCCGCGC CACCCGCGCC GGGGCGCTGT CGGGCGGTGA GCGCCAGCAA CTGGCCTTCG CCCGCGCCCT GATGCCCGCC CCCCGGCTGG TCATCCTCGA TGAACCGACG GCGGCCCTTT CCCCCGCCCT GGTCACCGGC GTTCTCGAGA CCATTCGCGG CCTGCCGGGG CTGGGCGTTT CGGTGCTGCT GGTCGAACAG CGCGCCCGTC AGGCCCTGGC GATCAGCGAT CAGGGCTGCA TCCTTGATAG CGGCAAGGTG GTGATCGCCG ATCGCGCCAG CGCCTTGCTG GCCGACGAGC GCATGGCCGA ATTGTACCTG GGCGAGCATT GA
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Protein sequence | MSVLVVEGMA AGYGDVDILS DIALRVDPLE IVTIAGTNGA GKSTLVKGLM GLLTRIRGKV EFEGTSLLGV AAERRIHLGI SYVPQVNNVF PSLTVLENLE VVEGVGNRAR QIAKMIERFP ALAARRATRA GALSGGERQQ LAFARALMPA PRLVILDEPT AALSPALVTG VLETIRGLPG LGVSVLLVEQ RARQALAISD QGCILDSGKV VIADRASALL ADERMAELYL GEH
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