Gene Rru_A3399 details

Gene Information

• Locus tag: Rru_A3399
• ID: 3836851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 3915285
• End bp: 3915767
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637827520
• Product: BadM/Rrf2 family transcriptional regulator
• Protein accession: YP_428480
• Protein GI: 83594728
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.22675
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATATCGC AAAAAGCCAA ATACGGGTTT CGGGCTCTCT TCGCTTTGGC CGATGCAGAG 
GGCGGCCAGT TGAGGATCGA GGATATCGCC GAGCGCCAGC GTATTCCGCG CAAGTTCCTC 
GAACAGATCC TGCTTGACCT GAAACACCAT GGGCTGGTCG TCAGCTTCCG TGGCAAGAAT 
GGCGGCTATG CCCTGCGCCG CGATCCCAAG GATATTTCCT TCACCGAGGT CCTTCGCCTG 
ATCGACGGAC CGATCGCCCC CCTGCCCTGC CTCAGCCGCA CCGCCTATCG CGCCTGCGAG 
GATTGCGAGG GCGAGACGGC CTGCCGGATG CGCCTGGTGT TCGGGGCGGC TTACGACCGC 
ATGCTCGAGG TTCTGGAAAC CACCAGCCTG GGCGATGCGA TGAACGGCCG CCTTGGCGGC 
GGTCTGTCGC CGCTGATCGA CGACACCGAC ACCCCCGCCG CCCCCCGCGC CCTCAACGCC 
TGA 

 

Protein sequence

MISQKAKYGF RALFALADAE GGQLRIEDIA ERQRIPRKFL EQILLDLKHH GLVVSFRGKN 
GGYALRRDPK DISFTEVLRL IDGPIAPLPC LSRTAYRACE DCEGETACRM RLVFGAAYDR 
MLEVLETTSL GDAMNGRLGG GLSPLIDDTD TPAAPRALNA