Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3393 |
Symbol | |
ID | 3836845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3910206 |
End bp | 3912161 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637827514 |
Product | penicillin-binding protein 1A |
Protein accession | YP_428474 |
Protein GI | 83594722 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCA GACCCCAAAC AGACCGCATG GCGCCCGTTT TCGAGGCCTC CGCCCCCTCC CGCCCGCCGC TGATCGCCGA GCGGGTGGTG CCGGAGCTAA GCGACGACGC GCCCCGACGC GCCGCCCCCT CGCCGCGCCC GCCGCCCCGT CGCCGCAAGC CCGGTCGCTC ACCGGCGCGC AAGGCGCCGC GCCGGCCGCG GCGGCGGTGG GTTTGGCCGC TGATCCGCCT GATGCTGGTC GGGGTGATCT GGATGGTGAT CGGTCTGGCC GGGGTGGTCG TATGGTTCGG CCATGACCTG CCCGACCCGG TGACGTCGGC CAATGTGACG CGGCGGCCCT CGGTGACGCT GCTTGCCGCC GATGGCAGCC AATTGGCCTC CTTTGGCGAT ATCCAGGGCG ATACCGTGCG CACGAGCGAC GTGCCCCGCG CCCTGGTTCT GGCGATTCTC GCCACCGAGG ACCGGCGGTT CTTCAAGCAT TTCGGCCTGG ATCTGGTGGG TATCGCCCGC GCCAGCGTGG TCAACCTGCG GGCGGGGCGG GTGGTCCAGG GCGGATCGAC GCTCACCCAG CAGGTCGCCA AGAACCTGTT CCTGACCCAC GACCGCACCT TCAAACGCAA GATCCAGGAG GTCTTGCTGG CGCTGTGGCT GGAACAAACC TTCACCAAGG ACCAGATTCT CAGCCTTTAT CTCAACCGCG TTTATCTGGG CGCGGGCACC CACGGCGTCG ATGCGGCGGC GCGGCGCTAC TTCGACCAGC CGGTGGGGCA GATCAATCTT TACCAAGCGG CGTTGCTGGC CGGGCTGCCC AAGGCGCCCT CGCGCCTGAA CCCGGTGACC AATCCCGACG GATCGCGGGT TCGCACCCTT CAGGTGCTGC AAAACATGGT CGAGGCCAAG ATGATCACCC CGGCCCTGGC CAAACAGGCC GCGGCCTTGG CCGACGGGGC GATTCCCGGC GCCCGGCGCG GCGGCATGGG CAGTTATTTC GCCGATTGGA TCCTTGAGCG CGTCGATGAT TTCGCCGGCC CCCGCGACCG CGATCTGATC GTGCGAACCA CCCTTGATCC GGTGCAGCAG CGCTCGGCCG AGGCGGCGGT GGCCGGGCTG CTCGCCGAAA AAGGCGCGGC GATGAAGGCC AGTCAGGCCG CCCTGGTCGC CCTCGCCCCC GATGGCGCGG TGACGGCGAT GGTGGGGGGG CGCGATCACG CGACCAGCCC GTTCAACCGG GCGGCCCAGG CCCGCCGCCA GCCGGGCAGC GCCTTCAAGC CCTTCGTCTT TCTGGCGGGG CTGGAAGCTG GGCTGACGCC CTCGACGATG ATGGACGACG CGCCGATCAC GGTGAACGGC TGGTCGCCGG GCAATTACAA GGACAAATAC AAGGGGCGGG TCAGCCTGAC CCAGGCCTTC GCCCAGTCGC TCAATACGGT GGCGGTGCGG GTGAGCGAAA CCGCCGGGCG CGGCGCCGTG GTCAAGGTCG CCCATCGCCT GGGGGTTATC GGATCGCTCT CGCCCCTGCC CTCGATCGCG CTCGGCGTCT TCGAGGTCTC GCCGCTGGAT CTGACGGCGG CCTATGCCCC CTTCGCCAAC GGCGGTTATG CGGTGGTGCC CCACGGCATT CTGAGCATCG CCGATCGCGA TGGCGGCCTG CTCTATGAAC GCCAGGACAG CGGGCCGCGC CGGGTTGTGG CGCCCGAACT CGCCCGGTCG ATGGATACGA TGCTAGGCGC CGTGGTGTCC TGGGGAACCG GACGGGCGGC GGGGCTGCCC GATCGCACGG CGCGCGGCAA GACCGGAACC AGCCAGGGAT ACCGCGACGC TTGGTTCGTC GGCTATGCCG GCAAAACCCT GGCCGGAGTC TGGGTCGGCA ATGACGATGG CACGCCGATG CGCGATGTCA CCGGCGGTAT TCTGCCCACG CAGATCTGGC ATGCCTTCAT GCTGAACGCC CCGTAA
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Protein sequence | MARRPQTDRM APVFEASAPS RPPLIAERVV PELSDDAPRR AAPSPRPPPR RRKPGRSPAR KAPRRPRRRW VWPLIRLMLV GVIWMVIGLA GVVVWFGHDL PDPVTSANVT RRPSVTLLAA DGSQLASFGD IQGDTVRTSD VPRALVLAIL ATEDRRFFKH FGLDLVGIAR ASVVNLRAGR VVQGGSTLTQ QVAKNLFLTH DRTFKRKIQE VLLALWLEQT FTKDQILSLY LNRVYLGAGT HGVDAAARRY FDQPVGQINL YQAALLAGLP KAPSRLNPVT NPDGSRVRTL QVLQNMVEAK MITPALAKQA AALADGAIPG ARRGGMGSYF ADWILERVDD FAGPRDRDLI VRTTLDPVQQ RSAEAAVAGL LAEKGAAMKA SQAALVALAP DGAVTAMVGG RDHATSPFNR AAQARRQPGS AFKPFVFLAG LEAGLTPSTM MDDAPITVNG WSPGNYKDKY KGRVSLTQAF AQSLNTVAVR VSETAGRGAV VKVAHRLGVI GSLSPLPSIA LGVFEVSPLD LTAAYAPFAN GGYAVVPHGI LSIADRDGGL LYERQDSGPR RVVAPELARS MDTMLGAVVS WGTGRAAGLP DRTARGKTGT SQGYRDAWFV GYAGKTLAGV WVGNDDGTPM RDVTGGILPT QIWHAFMLNA P
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