Gene Rru_A3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3390 
Symbol 
ID3836842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3907005 
End bp3908420 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content62% 
IMG OID637827511 
Producthypothetical protein 
Protein accessionYP_428471 
Protein GI83594719 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCGA GGCCTTTTGA CGAGATGACC AATCCGGACG GGGGCATCCG CTCCCCTTAC 
GGGCTTTATA GCGACTGGGT CAACCAGACT CCGCTTGATG TCCTGCGGCA AAAACACGCC
CAGGCCGATG TGCTGTTTCG CCGCATCGGC ATCACCTTCG CGGTTTATGG GGACAATCAG
GGTGGCGAGC GGCTGATCCC CTTCGACGTG GTGCCGCGCA TCATCAGCAA AAAGGAATGG
GACATCCTGT CGCGCGGTGT CTGCCAGCGG GTCGACGCCT TGAACCGCTT CATTTACGAC
GTCTATCACG ATCAGGAGAT CCTGAAGGCC GGCAAGGTGC CTAAGGGGCT GGTGCGCAAC
AACGGCCAGT TCCGCAAGGA GATGGTCGGC TTCACGCCGC CGCGAAACCT CTATGTGCAG
ATCGCCGGCA TCGACATCGT GCGCACCGCC GAGAACGAGT TCCATGTGCT CGAGGATAAT
CTGCGCACGC CCTCGGGGGT GTCCTACATG CTGGAGAACC GCGATGTGAT GACGCGGCTG
TTTCCCGAGC TGTTCAACCG TCACCCGGTG GCCCCGGTCA ATCATTACGC CCAGGAACTG
TTGAAAACGC TCCAGTACAG CGCTCCCGAC CATGCCGATA ATCCCACCGT TGTTGTGCTG
ACCCCGGGCC AGTACAACAG CGCCTATTTC GAGCACGCCT TCCTCGCCGA CGAGATGGGG
ATCGAACTGG TTCAGGGGCA GGATCTGTTC GTCGAAGGCG GCCATGTTTA CATGCGCACC
ATCGCCGGGC CCCAGCGCGT CGATGTGATC TATCGGCGGA TCGACGACGA TTTCCTTGAT
CCGCTGGCCT TCCGCAAGGA CTCGATGCTG GGCGTGCCCG GCTTGTTCGA GGCCTATCGC
AGCGGCGCCG TCACCCTGGC CAACGCCATC GGCACCGGCA TCGCCGATGA CAAGGCGATC
TATGACTTCG TCCCGGGGAT GATCGAATTC TACCTGGGCG AAAAGCCGAT CCTGCGCAAC
GTGCCGACCT ACCACCTCGA TGACGACGAC GACCGCGCCT ATGTGCTTGA GCATCTGGCG
GAGTTGGTGG TCAAGGAGGT CCATGGCTCG GGCGGCTATG GCATGCTGGT CGGCCCGAGG
GCCAGCCGTC AGCAGATCAG CGATTATCGG GATCGGATCC TGGCCGATCC GGCCAATTTC
ATCGCCCAGC CGACACTCGC CCTCTCAACC TGCCCGACCT TTGTCGATCA GGGGCTGGCG
CCCCGCCACG TCGATTTGCG GCCCTTCGTG CTGGCGGGCA AGACCACCCA GGTGGTGCCC
GGCGGGCTGA CCCGGGTGGC GCTTGAAAAA GACTCGCTGG TGGTCAATTC CTCGCAAGGG
GGTGGCACCA AGGACACCTG GGTATTGGAG CGCTGA
 
Protein sequence
MPPRPFDEMT NPDGGIRSPY GLYSDWVNQT PLDVLRQKHA QADVLFRRIG ITFAVYGDNQ 
GGERLIPFDV VPRIISKKEW DILSRGVCQR VDALNRFIYD VYHDQEILKA GKVPKGLVRN
NGQFRKEMVG FTPPRNLYVQ IAGIDIVRTA ENEFHVLEDN LRTPSGVSYM LENRDVMTRL
FPELFNRHPV APVNHYAQEL LKTLQYSAPD HADNPTVVVL TPGQYNSAYF EHAFLADEMG
IELVQGQDLF VEGGHVYMRT IAGPQRVDVI YRRIDDDFLD PLAFRKDSML GVPGLFEAYR
SGAVTLANAI GTGIADDKAI YDFVPGMIEF YLGEKPILRN VPTYHLDDDD DRAYVLEHLA
ELVVKEVHGS GGYGMLVGPR ASRQQISDYR DRILADPANF IAQPTLALST CPTFVDQGLA
PRHVDLRPFV LAGKTTQVVP GGLTRVALEK DSLVVNSSQG GGTKDTWVLE R