| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3380 |
|---|
| Symbol | |
|---|
| ID | 3836832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3896362 |
|---|
| End bp | 3897345 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637827501 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_428461 |
|---|
| Protein GI | 83594709 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2930] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCT CGTTCCCTTC CGTCTCTCCG GCGCTCCGGC GACCGGTCGC TTGTCTTGCG
GCGGCAGGGT TTCTCGCCTG CGCCCCGATC GCCCCGCTGT TCGCCCAAAG CGGCTCCCCG
CAATCGTTGA GCGCCCCGGC CTATGGCCAG GAATTCCAGA CCCCCCAGGG CGGCACCTAT
GCCACGCCGA CCACCCCGTC TTATAACGCC CCGACGGGCA CGCCGTCCTA TGCCGCTCCG
CCGGGCGGGA TGGCCCAGCC GATCGAAGAC ATGCCGGTGC GCGAGATCGG CACCCCGGCG
GTCAATACGC CGCCGCCCGA AGGGCCGGCG CCGGTAACCG ATCAGACGCG GATGGTGGCG
CCCGACGCCT CGGAATCGGC CGCTGACGCC CGGGCGACCA TTCTGTCGGC CGAAGCCACC
CTGACGCGGA TGACCTCGAC CACCGGTTTC AAGGACCAGC TTAAAACCCT GATCAGGCGC
TCGCGCGCCG TGCTGATCAT TCCCAGCTTC TATAAGGCCG GTTTTCTCGT CGGCGGCGCC
TATGGCCATG GCGTGCTGCT GGTGCGCTCC AGCGACGGCA GCTTCTCCGA CCCGGCCTTC
TATCGCCTGA CCGCCGGATC CTTCGGTTTC CAGTTCGGCG TGCAGGATAA TCAGGTGGTG
ATGGCGATCA TGACCGAGGC CGGCCTCAAG GCGGTGATGG AAGACCAGTT CAAGGGCGGC
GCCACCGCCA GCGTCAGCTT CTTCATGGTC GGGGCGGGGG CCGAGGCCTC GACCACCACC
GATGTCGGCG AGGATATCTA CGCCTTCTCG CAGTCGGTCG GGCTGTTCGG CGGCGCCGGG
CTGGAAGGCA CCAAGATCGA GCCGCGCCAA AGCTGGAACA TGGCCGTTTA TGGGGCGGGA
ACCACCGTGC GCAACGTTCT GTTCGACCGC CGCGTCTCCA CGCCGCTGGC GGCCAATCTG
AAGCACCTGC TCGCCAAACA GTGA
|
|---|
| Protein sequence | MPRSFPSVSP ALRRPVACLA AAGFLACAPI APLFAQSGSP QSLSAPAYGQ EFQTPQGGTY
ATPTTPSYNA PTGTPSYAAP PGGMAQPIED MPVREIGTPA VNTPPPEGPA PVTDQTRMVA
PDASESAADA RATILSAEAT LTRMTSTTGF KDQLKTLIRR SRAVLIIPSF YKAGFLVGGA
YGHGVLLVRS SDGSFSDPAF YRLTAGSFGF QFGVQDNQVV MAIMTEAGLK AVMEDQFKGG
ATASVSFFMV GAGAEASTTT DVGEDIYAFS QSVGLFGGAG LEGTKIEPRQ SWNMAVYGAG
TTVRNVLFDR RVSTPLAANL KHLLAKQ
|
|---|
| |