Gene Rru_A3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3378 
Symbol 
ID3836830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3894226 
End bp3895152 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID637827499 
Producthypothetical protein 
Protein accessionYP_428459 
Protein GI83594707 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.697299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATGT TCAGGGGACA TTTGCTGTGT TTCGGGCTGG GCTATTCCGC CTTGCGGTTG 
GCCCGCGGCC TGTTGCGCGA TGGCTGGCGG GTCAGCGGCA CCTGCCGGTC CGAGGAGAAG
CGCCAAGCGT TGAGCGCCCA GGGGATCACC GCCTTCGTCT TCGACGAGAC CACGCCGCTG
CCGGCCGAGG CCTGGACCGG GGTCACCCAT GTGCTGGTCT CCATCCCGCC GGGGCCCGAC
GGCGATCCGG TTCTCGCCTT GCACCGCGCC GATCTTCTGG CCCTGCGGCC GGAATGGCTG
GGGTATTTCT CAACCACCGG CGTTTACGGC GATACCGGTG GCGCCTGGGT TGACGAGGGC
AAGCCGGTGC GACCGACCCA GGAGCGCTCC AAGCGCCGGG TCGCCGCCGA GGAAGACTGG
CTTGATCTGT GGCGCGACGA GGATCTGCCC GTTCACCTGT TGCGGCTGGC CGGCATCTAT
GGCCCCGGCC GCAGCGTTTT CGATCAGCTG CGAGCGGGCA CCGCCAAGCG CATTATCCGG
CCCGGCCACG CCTTTTCGCG CATCCATGTC GATGATATCG GGCTGATCAC CCGGGCCAGC
ATGGCAGATC CCGACCCCGG CGCCATCTAT AATCTGGTCG ATGACGAACC GGCTGAACCC
TCCGAGGTGA TGGACCACGC CTGCGCCCTG CTCGGCATCG ATCCGCCGCC GGCCCAAAGC
TTTGACGAGG TGGCGCCCGG CCTGTCGCCG ATGGCCCTGT CGTTCTGGGC CGACAATCGC
AAGGTGTCCA ACGAACGTCT GTGGGACGAT CTGCGCCTGC GCCTGCTCTA CCCGACCTTC
CGCCAGGGGC TTGAAGCCAT CCTGGCCGAA GAGACCGGCC GGGTTGCCGA AGGCCCGCCG
GTCTATAAGG AAGCCTCGGA CTGCTAA
 
Protein sequence
MVMFRGHLLC FGLGYSALRL ARGLLRDGWR VSGTCRSEEK RQALSAQGIT AFVFDETTPL 
PAEAWTGVTH VLVSIPPGPD GDPVLALHRA DLLALRPEWL GYFSTTGVYG DTGGAWVDEG
KPVRPTQERS KRRVAAEEDW LDLWRDEDLP VHLLRLAGIY GPGRSVFDQL RAGTAKRIIR
PGHAFSRIHV DDIGLITRAS MADPDPGAIY NLVDDEPAEP SEVMDHACAL LGIDPPPAQS
FDEVAPGLSP MALSFWADNR KVSNERLWDD LRLRLLYPTF RQGLEAILAE ETGRVAEGPP
VYKEASDC