Gene Rru_A3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3372 
Symbol 
ID3836824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp3888170 
End bp3888781 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content66% 
IMG OID637827493 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_428453 
Protein GI83594701 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.212963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG CGCTTCGCGG CTATTTTGGA CTTGGCGTCG AAGGGGTAAG CAAGCCCTAT 
AACGTCGGCA ATGTCTTTCG CACCGCCCAT GCCTTCGGCG CCAGCTTCGT CTTCACCGTC 
GCGGCCAATT ACCGCCAGGA GGAGGGGGCG AAGGTCGACA CCTCCGACGC CCTGGCCTCC 
TTGCCGTTCT ATCGCTTCGG CGAGGTCGAC GACATGATGC TGCCCAAGGG CTGCAAACTG 
GTCGGGCTGG AGATCGTGCC CGAGTCGATC GACCTGCCCA GTTTCCGCCA TCCGTCCTGC 
GCCGCCTATG TGCTGGGCGC CGAACGCCAC GGCCTGTCGC CGGCGATGCT GGCGCGCTGC 
GACCATGTGG TTAAAATTCC CATGCGCTTC TCGATCAATC TCGGTATGGC CGGGGCGATC 
GTTCTTTATG ACCGGCTGAT CACCGTGGGA CGCTTCGCCC CGCGCCCGGT TCGGTCGGGC 
GGACCGACCG AGGCCCTGGA TACCCCGGTG CATGGCGGAC CGTTTTTCCG GGCCTCGGGG 
GCGGCCCATC TGGAGCGCTG GCGGGCGGCG CCGCCGCTGA ACGAGGTGGC GGAGGCCCGT 
GAAAAAGATT AA
 
Protein sequence
MTTALRGYFG LGVEGVSKPY NVGNVFRTAH AFGASFVFTV AANYRQEEGA KVDTSDALAS 
LPFYRFGEVD DMMLPKGCKL VGLEIVPESI DLPSFRHPSC AAYVLGAERH GLSPAMLARC 
DHVVKIPMRF SINLGMAGAI VLYDRLITVG RFAPRPVRSG GPTEALDTPV HGGPFFRASG 
AAHLERWRAA PPLNEVAEAR EKD