Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3339 |
Symbol | |
ID | 3836791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3850574 |
End bp | 3852361 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637827460 |
Product | putative inner membrane protein translocase component YidC |
Protein accession | YP_428420 |
Protein GI | 83594668 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.978164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCAAC AGCGTAACCT TATCCTCGCC ATCGTGCTGT CCATGGCGGT CCTGTTCGGC TTCGAATACT TCTTCGGAGC CAAGCAACCC CCGATGACGG CGCAGCAGCA GGACAGCGCC CAGATGGCGG CGCCATCAAA CGGTCAGATG GCGGCGCCAT CAAGCGTCCA GGCGCCGGGA CAAAGCCCGG TCGCGGCACC GCAGGTGCCC GCCCAGCCGG GCGCGGCGGT TCCCACGCCC GGCGGCATGA CCCCCGGCGC GGCAAGCCTG TCGCGTGAAG AGGCCCTGGC CGCCGATATC AGCCCGCGAA TCGGCATCGA TACCGCCCGC CTGCATGGCT CGATCCGCCT GCGCGGCGCC CGTATCGACG ACCTTAGCTT GGTCGATTAC CGCGAGACCG TTGATCCGCA GAGCCCGGAA ATCTCCCTGC TTTCGCCCCC GGGCGCGCCT TTGCCCTATT ATGCCGAATT CGGCTGGGTC GCCGGCACCC CGGGCGTCAA GGTCCCCGAT GCCGACACCC TGTGGCAGGC CGACCGCGGC GCGCTGGGCG TCGACGCCCC CGTCACCCTG ACCTGGGACA ACGGCGAGGG CCTGCGCTTC ATCCGCAAGA TCGCCATCGA CCACGATTTC ATGTTCTCGA TCACCCAGGC GGTGGAAAAC ACCGGGGCGG GGGCCGTCAC CCTGTTCCCC TATGGTCTGG TTTCGCGGAT CAACACCCCG GCCCTGCTCA ACTACTACAT CCTTCACGAG GGCCCGCTCG GCGTCTTCGA CGGCACCTTG AAGGAGGTCA AGTACAGCGC CCTGAAGGAC GATGGCGAGG TCAAGCACAC CTCGACCGGC GGCTGGATGG GCATCACCGA CAAGTATTGG CTGACCGCCC TGGTCACCGA CCAGTCGATG CCGGTCACCG GCCGCTTCCT CTATCAGCCG CGCGATGGCC GCGATGGTTA TCAGGCCGAT TTCCTGGGCG CCGCCTTCAC CGTCGAGCCC GGCGGCCGCA TCGAGACCTC GAACCATCTG TTCTCGGGCG CCAAGGAAGT GAAGCTGCTC GACCGCTATA CGGACGAGCT GGGCATCAAG AATTTCGATC TGGCGATCGA TTTCGGCTGG TTCTACTTCA TGACCAAGCC GTTCTTCCTC AGCATCCAGT TCCTGCATGG CATCCTGGGC AACATGGGTC TGGCGATCCT CGCCTTCACC GTGGTGCTGA AGCTGGTCTT CTTCCCGCTG GCCAATAAGT CCTATCGGTC GATGTCGAAG ATGAAGCTGC TCCAGCCCGA GCTGAAGAAG CTTCAGGAGC GCTTCAAGGA CGATCGCGCC CGCCTTAATC AGGAGATGAT GTCTCTTTAT AAAAAAGAGC AGGTCAATCC CTTGTCGGGC TGTCTGCCGA TCGTCATTCA GATCCCGGTG TTCTTCGCCC TCTATAAGGT TCTGTTCGTT TCCATCGAGA TGCGCCACGA GCCGTTCTAT GGCTGGATCC GCGATCTCGC CGCCCCCGAT CCGACCACCG TCTTCAACCT GTTCGGGCTG ATCCCCTGGG ATCCGCCGAA CATGCTGATG CTGGGCGCTT GGCCGCTGAT CATGGGCGTG ACCATGTGGA TGCAGCAGAA GCTGAACCCG ACTCCGGCCG ATCCGACCCA GGCCAAGATC ATGATGTTCC TGCCCATCAT GTTCACCTTC ATGCTGGCCC ATTTCGCCGC CGGACTGGTG ATCTACTGGA CCTGGAACAA CTTGCTCTCG ATCACCCAGC AGTGGGTCAT CATGAAGCGG ATGGGGGCTA AGACCTAA
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Protein sequence | MLQQRNLILA IVLSMAVLFG FEYFFGAKQP PMTAQQQDSA QMAAPSNGQM AAPSSVQAPG QSPVAAPQVP AQPGAAVPTP GGMTPGAASL SREEALAADI SPRIGIDTAR LHGSIRLRGA RIDDLSLVDY RETVDPQSPE ISLLSPPGAP LPYYAEFGWV AGTPGVKVPD ADTLWQADRG ALGVDAPVTL TWDNGEGLRF IRKIAIDHDF MFSITQAVEN TGAGAVTLFP YGLVSRINTP ALLNYYILHE GPLGVFDGTL KEVKYSALKD DGEVKHTSTG GWMGITDKYW LTALVTDQSM PVTGRFLYQP RDGRDGYQAD FLGAAFTVEP GGRIETSNHL FSGAKEVKLL DRYTDELGIK NFDLAIDFGW FYFMTKPFFL SIQFLHGILG NMGLAILAFT VVLKLVFFPL ANKSYRSMSK MKLLQPELKK LQERFKDDRA RLNQEMMSLY KKEQVNPLSG CLPIVIQIPV FFALYKVLFV SIEMRHEPFY GWIRDLAAPD PTTVFNLFGL IPWDPPNMLM LGAWPLIMGV TMWMQQKLNP TPADPTQAKI MMFLPIMFTF MLAHFAAGLV IYWTWNNLLS ITQQWVIMKR MGAKT
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