Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3332 |
Symbol | |
ID | 3836784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3843795 |
End bp | 3845285 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637827453 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_428413 |
Protein GI | 83594661 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.260717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACGCAGG CGACCATAGC GCGCGGCGCG CGGGCGGATA CCGAGCCCTA CGTCGAGGGC GTGATCAAGA AGTTCGTCAT CGCAGCGGTT CTGTGGGGCG TGGTTGGATT TATCGCCGGC GACGTCATCG CCTGGCAGCT GGCGTTCCCG TCGCTGAACA TGGACCTGGA ATGGACCAGT TTCGGTCGCT TGCGTCCCCT TCACACCTCC GCGGTGGTTT TCGCCTTCGG TGGCAACGTC CTGCTTGGCA CGTCGCTCTA TGTTGTCCAG CGAACCTCGC GCGCCAGCCT GTATGGCGGC GCCGCGCTTG GCAATATCAT CTTCTGGGGC TACCAGCTGT TCATCGTCAT GGCCGCTCTC GGCTATGTGC TGGGCGTCAC CCAGGGCAAG GAATATGCCG AGCCCGAATG GTTCGTCGAC CTGTTCCTGA CCGTGGTCTG GGTGCTTTAT CTGGCGGCTT TCCTCGGCAC CCTTCTCAAG CGCCGCGAGC CCCATATCTA TGTCGCCAAC TGGTTCTTCC TGGCGATGAT CATCACCATC GCCCTGCTGC ACCTGGGCAA CAACATGGCC ATTCCCGTCG CCCTGATGGG CGGCGACTCG TGGGTCAAAA GCTACGGCTT CTATTCGGGC GTCCAGGACG CCATGACCCA ATGGTGGTAT GGGCATAACG CCGTCGGCTT CTTCCTGACC GCCGGTTTCC TCGGCATCAT GTATTATTTC GTGCCCAAGC AGGCGCAGCG CCCGGTCTAT TCCTACCGGT TGTCGATCGT GCACTTCTGG GCGCTGATCT TCCTTTATAT CTGGGCCGGT CCCCATCACC TGCATTACAC CGCCCTGCCC GATTGGGCGC AGACGGTGGG CATGGTGTTC TCGGTGATGT TGTGGATGCC CTCCTGGGGA GGGATGATCA ACGGCCTGAT GACGCTGTCG GGGGCCTGGG ACAAGCTGCG CACCGATCCG GTCTTGCGCT TCCTGGTGGT CTCCGTCGGC TTCTATGGCA TGTCGACCTT CGAAGGGCCG ATGATGTCGA TCAAGGCCGT CAACTCGCTG TCCCACTACA CCGATTGGAC CATCGGCCAC GTGCATTCCG GGGCCCTGGG CTGGGTGGCC TTCGTGTCCT TCGGCGCGCT CTATTACCTG GTTCCGGCCC TGTGGAAGCG CCGCTCGCTG TATTCCCTGA AACTCGTCAG CCTGCACTTC TGGATCGCTA CCCTGGGCAT TGTGCTCTAC ATCACCTCGA TGTGGGTCTC GGGCATCATG CAGGGCCTGA TGTGGCGCGC TTACGACGAG TTGGGGTTCT TGCAGTACTC GTTCATCGAA TCCGTGGCCG CCATGCATCC CTATTACATC ATCCGGGCGA CCGGCGGGGT GCTGTTCGTC ATCGGCTCGG TGGTGATGGT CTACAACATG TATCGCACCA TCAAGGGTGA CATCCGCGAG GACGCGCCCC AGGCGGCCTA TCTCGGGTCC GCCGCCGGTG TCCGACGGTA A
|
Protein sequence | MTQATIARGA RADTEPYVEG VIKKFVIAAV LWGVVGFIAG DVIAWQLAFP SLNMDLEWTS FGRLRPLHTS AVVFAFGGNV LLGTSLYVVQ RTSRASLYGG AALGNIIFWG YQLFIVMAAL GYVLGVTQGK EYAEPEWFVD LFLTVVWVLY LAAFLGTLLK RREPHIYVAN WFFLAMIITI ALLHLGNNMA IPVALMGGDS WVKSYGFYSG VQDAMTQWWY GHNAVGFFLT AGFLGIMYYF VPKQAQRPVY SYRLSIVHFW ALIFLYIWAG PHHLHYTALP DWAQTVGMVF SVMLWMPSWG GMINGLMTLS GAWDKLRTDP VLRFLVVSVG FYGMSTFEGP MMSIKAVNSL SHYTDWTIGH VHSGALGWVA FVSFGALYYL VPALWKRRSL YSLKLVSLHF WIATLGIVLY ITSMWVSGIM QGLMWRAYDE LGFLQYSFIE SVAAMHPYYI IRATGGVLFV IGSVVMVYNM YRTIKGDIRE DAPQAAYLGS AAGVRR
|
| |