Gene Rru_A3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3332 
Symbol 
ID3836784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3843795 
End bp3845285 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content62% 
IMG OID637827453 
Productcbb3-type cytochrome c oxidase subunit I 
Protein accessionYP_428413 
Protein GI83594661 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3278] Cbb3-type cytochrome oxidase, subunit 1 
TIGRFAM ID[TIGR00780] cytochrome c oxidase, cbb3-type, subunit I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.260717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGCAGG CGACCATAGC GCGCGGCGCG CGGGCGGATA CCGAGCCCTA CGTCGAGGGC 
GTGATCAAGA AGTTCGTCAT CGCAGCGGTT CTGTGGGGCG TGGTTGGATT TATCGCCGGC
GACGTCATCG CCTGGCAGCT GGCGTTCCCG TCGCTGAACA TGGACCTGGA ATGGACCAGT
TTCGGTCGCT TGCGTCCCCT TCACACCTCC GCGGTGGTTT TCGCCTTCGG TGGCAACGTC
CTGCTTGGCA CGTCGCTCTA TGTTGTCCAG CGAACCTCGC GCGCCAGCCT GTATGGCGGC
GCCGCGCTTG GCAATATCAT CTTCTGGGGC TACCAGCTGT TCATCGTCAT GGCCGCTCTC
GGCTATGTGC TGGGCGTCAC CCAGGGCAAG GAATATGCCG AGCCCGAATG GTTCGTCGAC
CTGTTCCTGA CCGTGGTCTG GGTGCTTTAT CTGGCGGCTT TCCTCGGCAC CCTTCTCAAG
CGCCGCGAGC CCCATATCTA TGTCGCCAAC TGGTTCTTCC TGGCGATGAT CATCACCATC
GCCCTGCTGC ACCTGGGCAA CAACATGGCC ATTCCCGTCG CCCTGATGGG CGGCGACTCG
TGGGTCAAAA GCTACGGCTT CTATTCGGGC GTCCAGGACG CCATGACCCA ATGGTGGTAT
GGGCATAACG CCGTCGGCTT CTTCCTGACC GCCGGTTTCC TCGGCATCAT GTATTATTTC
GTGCCCAAGC AGGCGCAGCG CCCGGTCTAT TCCTACCGGT TGTCGATCGT GCACTTCTGG
GCGCTGATCT TCCTTTATAT CTGGGCCGGT CCCCATCACC TGCATTACAC CGCCCTGCCC
GATTGGGCGC AGACGGTGGG CATGGTGTTC TCGGTGATGT TGTGGATGCC CTCCTGGGGA
GGGATGATCA ACGGCCTGAT GACGCTGTCG GGGGCCTGGG ACAAGCTGCG CACCGATCCG
GTCTTGCGCT TCCTGGTGGT CTCCGTCGGC TTCTATGGCA TGTCGACCTT CGAAGGGCCG
ATGATGTCGA TCAAGGCCGT CAACTCGCTG TCCCACTACA CCGATTGGAC CATCGGCCAC
GTGCATTCCG GGGCCCTGGG CTGGGTGGCC TTCGTGTCCT TCGGCGCGCT CTATTACCTG
GTTCCGGCCC TGTGGAAGCG CCGCTCGCTG TATTCCCTGA AACTCGTCAG CCTGCACTTC
TGGATCGCTA CCCTGGGCAT TGTGCTCTAC ATCACCTCGA TGTGGGTCTC GGGCATCATG
CAGGGCCTGA TGTGGCGCGC TTACGACGAG TTGGGGTTCT TGCAGTACTC GTTCATCGAA
TCCGTGGCCG CCATGCATCC CTATTACATC ATCCGGGCGA CCGGCGGGGT GCTGTTCGTC
ATCGGCTCGG TGGTGATGGT CTACAACATG TATCGCACCA TCAAGGGTGA CATCCGCGAG
GACGCGCCCC AGGCGGCCTA TCTCGGGTCC GCCGCCGGTG TCCGACGGTA A
 
Protein sequence
MTQATIARGA RADTEPYVEG VIKKFVIAAV LWGVVGFIAG DVIAWQLAFP SLNMDLEWTS 
FGRLRPLHTS AVVFAFGGNV LLGTSLYVVQ RTSRASLYGG AALGNIIFWG YQLFIVMAAL
GYVLGVTQGK EYAEPEWFVD LFLTVVWVLY LAAFLGTLLK RREPHIYVAN WFFLAMIITI
ALLHLGNNMA IPVALMGGDS WVKSYGFYSG VQDAMTQWWY GHNAVGFFLT AGFLGIMYYF
VPKQAQRPVY SYRLSIVHFW ALIFLYIWAG PHHLHYTALP DWAQTVGMVF SVMLWMPSWG
GMINGLMTLS GAWDKLRTDP VLRFLVVSVG FYGMSTFEGP MMSIKAVNSL SHYTDWTIGH
VHSGALGWVA FVSFGALYYL VPALWKRRSL YSLKLVSLHF WIATLGIVLY ITSMWVSGIM
QGLMWRAYDE LGFLQYSFIE SVAAMHPYYI IRATGGVLFV IGSVVMVYNM YRTIKGDIRE
DAPQAAYLGS AAGVRR