Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3303 |
Symbol | |
ID | 3836750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3802218 |
End bp | 3803432 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637827419 |
Product | amide-urea binding protein |
Protein accession | YP_428385 |
Protein GI | 83594633 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.219547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTCA CGCCGCGCCG CGCCCTGATT TCCGCCCTTC TCCTTGGCCT CGCCCCTTAC GCCCAGGCGG CGGAGATTTC CGATAAGGTC ATTCGCATCG GCGTTCTCAA CGACCAATCC GGGGTCTATG CCGATATCGC CGGCACCGGA TCGGTCGAAG CCGCGCGCAT GGCCGCCGAG GAATTCGGTG GCGAGATCGA CGGCGCCAAG ATCGAATTCG TTTCCGCCGA CCATCAGAAC AAGGCCGATA TCGCCGCCAA TGTCGCCAAT CAATGGATCG ACACCGGCGG CGTCGATGCC ATCGTCGACA TCCCCAATTC CTCGGCCATG CTCGCCGTTC AGGAAATCGG CCGAACCAAG AAGCGCATCG TCATCGCCTC GGGCGGCGGG TCGACGGATT TCACCGGCCC CAAATGCAGC CCCTATGGCT TCCATTGGAC CTATGACACC TATTCCCTGG CCAAGGGCAC GGCCGAATCC CTGGTCAAGG ACGGCGGCAC CACCTGGTAC AACATCGTCG TCGATTACGC CTTCGGCCAT TCCCTTGATA CCGATACCTC GCGCTTCATC ACCCAGGCCG GCGGTCAGGT GGTCGGCCGC GTTCTCCACC CGCTCGGCAC CTCGGACTTC TCGTCCTATC TGCTCCAGGC CCAGGGCTCG GGGGCCAAGG TCATCGGCGT GCTCAGCGCC GGGGCCGATA CGGTCAACGC CATCAAACAG GCCGCCGAAT TCGGCATCAC CCAGGGCGGG CAGATCCTGG CCGGGCTGCT GATCTTTGAT CAGACCGTCC ATTCCCTGGG GTTGGAAACC GCCCAGGGCC TGCGGCTGAC CACCGGCTTC TATTGGGACC GCACCGATGC CACCCGGGCG TGGTCGGCGG AATTCCTCAA GCGCAGCACC AAGAACATCC CCAGCATGGC CCATGCCGGC GTCTATTCCG GGGTGCGCCA TTATCTGGCG GCGATCAAGG CGGCGGGCAC CGATAACGCC GACGCCGTGG CGGCCAAGAT GCGCGAAACC CCGGTCAACG ACATGTTCGC CGAAAACGGC ACGGTCCGCG CCGACGGCCG TATGGTCCAC GACATGTACC TGATGGAGGT CAAGAAGCCC GCCGACTCGA CCAGCGAGTG GGATCTGATG CGTCTGGTCC ACGTTATCCC CGGCGAGGAG GCTTACCGCC CCTTGGCCGA AGGTGGTTGC CCGCTAGTCC AGTAA
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Protein sequence | MTFTPRRALI SALLLGLAPY AQAAEISDKV IRIGVLNDQS GVYADIAGTG SVEAARMAAE EFGGEIDGAK IEFVSADHQN KADIAANVAN QWIDTGGVDA IVDIPNSSAM LAVQEIGRTK KRIVIASGGG STDFTGPKCS PYGFHWTYDT YSLAKGTAES LVKDGGTTWY NIVVDYAFGH SLDTDTSRFI TQAGGQVVGR VLHPLGTSDF SSYLLQAQGS GAKVIGVLSA GADTVNAIKQ AAEFGITQGG QILAGLLIFD QTVHSLGLET AQGLRLTTGF YWDRTDATRA WSAEFLKRST KNIPSMAHAG VYSGVRHYLA AIKAAGTDNA DAVAAKMRET PVNDMFAENG TVRADGRMVH DMYLMEVKKP ADSTSEWDLM RLVHVIPGEE AYRPLAEGGC PLVQ
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