Gene Rru_A3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3278 
Symbol 
ID3836725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp3776040 
End bp3777023 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content65% 
IMG OID637827394 
ProductADP-glyceromanno-heptose 6-epimerase precursor 
Protein accessionYP_428360 
Protein GI83594608 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCG TTACCGGTGG CGCCGGGTTC ATCGGCTCCA ATATTCTGGC CGGGCTGGAA 
GAGCGCGGCC ATGGCGACCT CGTTCTGGTC GACCGCCTGC GCGATGGCGT CAAATGGCGC 
AATGTGGCCA AGCGCGATCT GGCCGATATC GTCGCTCCCG AAGCCTTGCC CGCCTTTCTC 
GACGGCCATC GCGGCGAGGT TTCGGCGATC CTTCACATGG GGGCGATCTC GGCGACGACC 
GAGCGCGACG CCGATCGCAT CATTGAAAAC AACTTCCGTC TGTCGCGCGA TCTGTGGCTG 
TGGTGCGCGG CCAATGGCGC GCGCTTCGTC TATGCCAGCA GCGCCGCCAC CTATGGCGAT 
GGCGCCCTCG GGTTCGATGA CGATTTTTCC CCGGCCGCCC TGGCCCGCCT GCGTCCGCTC 
AACGCCTATG GCTGGTCCAA GCATCTGTTC GACCGCAAGG TGCGTCATTG GGTCGACTCC 
GGGCCGGTGC CGCCGCAATG GGCCGGGCTG AAGTTCTTCA ACGTCTATGG GCCCAACGAA 
ACCCATAAGG GGCCGCAAAG CAGCGTCGTC AGCCAGATCC ATCCGGTGGC CCGGCGCGGC 
GAGTCCTTCG CCCTGTTCAA ATCCCATGAC CCGCGCTACG CCGATGGTGG CCAGTTGCGC 
GATTTCGTCT GGATCGGCGA TGTCGTCGAT ATCGTCCTCT GGCTGCTTGA AACGCCCAAG 
GTCAGCGGCC TGTTCAACGT GGGCACCGGC CGCGCCCGCA GCTTCGCCGA TCTGGCCGCC 
GCCGTTTATC GCGCCCTGGG CGCCGAGCCG GCGCTGACCT ATCGCGACAT GCCCGAGGCG 
CTGCGCGACA AATACCAGTA TTTCACCCAG GCCGAGATGG GCCGGCTGCG CGCGGCGGGC 
TATCCCGGGC AGGCCACGCC TTTGGAAGAG GGGGTGCGGC GCTATGTTCA GGACTATCTG 
GAACAAGCCG ATCCCTTCCG CTGA
 
Protein sequence
MIIVTGGAGF IGSNILAGLE ERGHGDLVLV DRLRDGVKWR NVAKRDLADI VAPEALPAFL 
DGHRGEVSAI LHMGAISATT ERDADRIIEN NFRLSRDLWL WCAANGARFV YASSAATYGD 
GALGFDDDFS PAALARLRPL NAYGWSKHLF DRKVRHWVDS GPVPPQWAGL KFFNVYGPNE 
THKGPQSSVV SQIHPVARRG ESFALFKSHD PRYADGGQLR DFVWIGDVVD IVLWLLETPK 
VSGLFNVGTG RARSFADLAA AVYRALGAEP ALTYRDMPEA LRDKYQYFTQ AEMGRLRAAG 
YPGQATPLEE GVRRYVQDYL EQADPFR