| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3250 |
|---|
| Symbol | |
|---|
| ID | 3836697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3745895 |
|---|
| End bp | 3746467 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637827366 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_428332 |
|---|
| Protein GI | 83594580 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5389] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.745967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGTTA CCCCATCGGA TAAGCCGCCT CCCGGCCCGG CGTCAGCCGA GCGCCGGGGC
AATGGGCCGC GCGCCCTGTC GGCGATTACC TTGCGGGCGG CCCTGCCGCT TCTGGCCAAA
CGCGGTCTGG CCGAAGAGGC CCTGCTGTCG CGCTGGGCCG AGGTGGTGGG ACCGATGCTG
GCCGCCCATG TCCATCCCAT GCGGCTGGTC CGCGCCCGGC GCAAACCGGG CGGCGAGGGC
GGGGTGCTGG GCGCGGGCGG GGTTTTGCAC CTGCGCGTCG AAGGCGGCGC GGTGGCCTTG
GAGCTTCAGC ATCGCCTGCC CCAGGTGATC GAGCGGGTCA ACGGCTTCCT CGGCTGGGCG
GCGGTCGAGC GCATCACCTT GCATCAGGGG CGGTTGCTGC GCACGAGAAC GGCGCCAGTG
CGTGAACCGC CGCCCCTGCC TGCCGAGCGC GCCGCCAGCC TGGGCAGCGG GCTTGAGGGG
GTGGATGATG CCGATTTGCG CGCCGCGCTG GCCCGCCTGG GAACCGCCGT CGGCCGGCTG
GAGGCCGGGC GCAGCCGGCG CCGTCCCGGC TAA
|
|---|
| Protein sequence | MAVTPSDKPP PGPASAERRG NGPRALSAIT LRAALPLLAK RGLAEEALLS RWAEVVGPML
AAHVHPMRLV RARRKPGGEG GVLGAGGVLH LRVEGGAVAL ELQHRLPQVI ERVNGFLGWA
AVERITLHQG RLLRTRTAPV REPPPLPAER AASLGSGLEG VDDADLRAAL ARLGTAVGRL
EAGRSRRRPG
|
|---|
| |