Gene Rru_A3236 details

Gene Information

• Locus tag: Rru_A3236
• ID: 3836683
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 3732023
• End bp: 3733975
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637827352
• Product: hypothetical protein
• Protein accession: YP_428318
• Protein GI: 83594566
• COG category: [V] Defense mechanisms
• COG ID: [COG0577] ABC-type antimicrobial peptide transport system, permease component; [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGACA CCCCCCCGCC GCTGATCGAG TTGATCGATC TGGAACGGGT TTTCGATTCG 
AGCGAGGTTC CGGTCCGCGC CCTTGACCGG GTTTCCCTGA CCATTCACGA AGGCGAATTC 
GTCGCCATCA TCGGCCAGTC GGGCTCGGGC AAATCCACGT TGATGAGCAT CCTCGGCTGC 
CTCGACCGCC CGACCGGCGG CCTCTACCGC CTGGGCGGCA TCGATGTCGC CAGCCTTGAT 
CCCGTCGCCC TGGCCGGCCT GCGCCGCGAT ACCTTCGGCT TCGTCTTCCA GCGCTATAAT 
CTGCTTGCCG GGGCCTCGGC GGCCGAGAAC GTCGAAATGC CCGCCGTCTA TGCCGGCCAG 
CCCCGCCACC AGCGCCTGGA ACGCGCCCAT GCGTTGCTTG ATCGCTTGGG GATGGGGGCG 
CGCAGCGGTC ACTTTCCCAA TCAGCTTTCG GGCGGCCAGC AGCAAAGGGT CTCGATCGCC 
CGGGCGCTGA TGAACGATCC CCGGGTGATC CTGGCCGACG AGCCGACCGG CGCCTTGGAC 
AGCGCCAGCG GCCGCGATGT CCTCGCCCTG CTTGAAGCCC TGCACACCGA GGGGCGGACG 
GTCATTCTGA TCACCCACGA CCGCGACGTG GCGGCGCGGG CCGAGCGGGT GATCGCCTTG 
CAAGACGGCC GGGTGGTTGA GGACAGCGGC CGGCCGGCCC CCGTGGGCAG CGACCGCCCG 
CTCGGCCGGC CGCCCGGCGG GGCGGCCTAT CTGGGCATGG CCGCCAGCTT CGGCGAGGCC 
TTGAAAATGG CCGGGCGCAG CCTGCGGGCC AATATCTTCC GCACCGCCCT GACCCTGCTT 
GGCGTGGTCA TCGGCGTCGC CGCCGTCGTC ACCATGATGG CGATCGGCGA AGGCAGCAAA 
CAAGACGTGC TGACCCGCAT CCAGTCGATG GGCACCAATC TGTTGCTGGT GCGTCCGGGC 
GCGCCGGGCA TCCGGCCAAG CGGCACCGAT GTGTCGTTGA CCCCCACTGA CGCCGAGGCC 
GTGGCCCAGC TTGCCGGCAT GGCGGCGGTG GCGCCCGAAC GCATGGCTTC GGGCATCACG 
GTGCGCCGCG AGGGCATTGA TTACCGCACC ACCATCAATG GCACCTGGCC GGCCTATGCG 
GCGGCCAAGG ACTGGCCGAT GGCCTGGGGC AGCTTTTTCG ACGCCACCGA CCTCCAAGCC 
TCGGCCCCCG TCGCCGTGCT GGGCCAGACG GTGGCCAAGA ACCTGTTTCC CGGCGAAGAA 
GACCCGGTCG GGTCCTATTT CCTGGTGCGC AACGTTCCCT TCCTGGTCAT CGGCGTTCTC 
GAAGCCAAGG GCGCCACGCC CTTTGGCCAG GACCAGGACG ATATCGTGCT AATCCCGCTG 
ACCACCGCCT TCGCCCGGGT TTCCGGCGGG CGCTATCTCA GTTCGCTGAC CGCCCGGGTC 
GAAGACGCGA CCACCATCGA CGAAAGCCAA GCCGCCATCG AATCCCTGCT TCAGGCCCGC 
CACGGCAAGG TCGATTTCCA GGTGCGCAAT ACCCAATCCT TGCTCGAAAT GGTGGAAAAG 
ACCCAGAACA GCCTGACCCT GCTGCTCGGC GCCGTCGCCT TGATCTCGCT GCTGGTCGGC 
GGCATCGGCG TGATGAACAT CATGCTGGTC AGCGTGACCG AGCGCACCCG CGAGATCGGC 
ATCCGTCTGG CGACGGGGGC GCGGGCCAGC GATATCTTGC TGCAATTCAA CACCGAGGCC 
GTCGCCGTCT GCGGCGTCGG CGGTCTAGCC GGCGTCGGCC TGGGGCTGGG GGCGGCGCTG 
GCCGTCGCCG AATTCGGCCT GCCGGTGCGC TTCACCCCGG GACCGCCGAT CGTCGCCTTC 
TGCTGCGCCT TTCTGACCGG ACTGCTGTTT GGCTATCTGC CCGCCCGCAA GGCCGCCCGC 
CTTGATCCCG TCGTCGCCCT GTCCGCCGAA TAG 

 

Protein sequence

MADTPPPLIE LIDLERVFDS SEVPVRALDR VSLTIHEGEF VAIIGQSGSG KSTLMSILGC 
LDRPTGGLYR LGGIDVASLD PVALAGLRRD TFGFVFQRYN LLAGASAAEN VEMPAVYAGQ 
PRHQRLERAH ALLDRLGMGA RSGHFPNQLS GGQQQRVSIA RALMNDPRVI LADEPTGALD 
SASGRDVLAL LEALHTEGRT VILITHDRDV AARAERVIAL QDGRVVEDSG RPAPVGSDRP 
LGRPPGGAAY LGMAASFGEA LKMAGRSLRA NIFRTALTLL GVVIGVAAVV TMMAIGEGSK 
QDVLTRIQSM GTNLLLVRPG APGIRPSGTD VSLTPTDAEA VAQLAGMAAV APERMASGIT 
VRREGIDYRT TINGTWPAYA AAKDWPMAWG SFFDATDLQA SAPVAVLGQT VAKNLFPGEE 
DPVGSYFLVR NVPFLVIGVL EAKGATPFGQ DQDDIVLIPL TTAFARVSGG RYLSSLTARV 
EDATTIDESQ AAIESLLQAR HGKVDFQVRN TQSLLEMVEK TQNSLTLLLG AVALISLLVG 
GIGVMNIMLV SVTERTREIG IRLATGARAS DILLQFNTEA VAVCGVGGLA GVGLGLGAAL 
AVAEFGLPVR FTPGPPIVAF CCAFLTGLLF GYLPARKAAR LDPVVALSAE