| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3230 |
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| Symbol | |
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| ID | 3836677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3723653 |
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| End bp | 3725437 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637827346 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_428312 |
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| Protein GI | 83594560 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.74861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTTC AAGCATCTTG CGTTGCCGAT CTGTCTTCCC TGGGCCGTGA CGTCGCTCTT
GATCCGGTGA TCAGCCTGCG CAGTGGCCGG GTCATCGGCT ATCAGGCGGT GGCCGGTCCG
CCCCCAGGGG GGCGCGAGGA AGACGATCTT CTTCTGCGCG AGGCGATCGA GGCGGCGGTC
TGGTCGTCGG CCATCGCCTT GTTCGCCGCC GTATCGGCCG GGCGCGACCA GCGCCTGTTT
CTTGGCCTTG ATTTCGGTCT TGTCGTGCGC TGGCCCGATA TGGCGGCGCG GCTGGCCATG
CTTCTTGATG CCCATGGCGT CGATCGCCGG GTGATCACGC TCAGCCTGTC CGAGCGCCGG
TCGATCCTTG ATTTGGGCGG CGGGTCTGGC GAGCGGGCGC TGGACCGGGT GGCCGGAGCG
GTGGTGCAGA TGCGCGGCGC TGTCGGCTCG ATCGCCCTGG ATGGCTTTGG CGGCGGTCAT
GCCGGCTTGG CGTTGTTGGC CGCGGTGAAG CCCGATTATG TCGTGCTTGA TCCCTATTTC
GTCTCGACCC AGGCGATCGA CCAGACGCGG CGGTTGTTTC TGGGGCATCT GGTCGACGTG
GCCCATTTGC TGGGCGCCCA GGTGATCGCC CCCCAGGTCG AGCATCTCGC CGATTATCAT
GCCTGCCGCG ACGCCGGCTG CGATCTGGTG CGCGGGCCGG TGCTGGCCAA GCCCGACCGT
GACCCCCGGC GCCTGCCCGA AGTCTATCCC CAGGTCGCCG CCCTCAATGC CACCAGCCAG
CGCCGAGGCC GTGGCGACCA ACATCTGGTG GCCGCCCAGA TGGACGAAAT CGATCCCTTG
ATGATTTCGA CAAAGATGGC CGATGTGTTC GAGCGCTTTC GCCGCCAGAA GGATCGCACG
TTCTTTCCGG TGGTCGACGA GCGCGGCGAA CCGCTGGGCA TCGTCCGCGA GGTCGATCTC
AAGGAATACA CCTATTCGCT CTATGGCAAG GATCTGATCG GCAACAAAGC CCTGGGCCGC
ACCCTGAGCG CCTTTCTCAC GCGCTGTCCG CGCGTTGACA TCGATACCCG GGCCGAAAAG
ATCCTGGAGG CTTTTTCCAC GACTCCCTCC AGCGACGGGC TGATCATCAC CCAGGATGGC
CGGTATCGGG GGTTTTTGAC GGCGGCTTCG CTGTTGCGGG TCATCAACGA CAAGAACCTT
GAGGTCGCCC GCGATCAGAA TCCGCTGACC CGTCTGCCGG GGAACACGGT GATCAACACC
GAATTGGGTG AAATCCTGGC CGATGATCGC CAGGGGGCCA GTCTGGTCTA TCTGGATTTC
GACCATTTCA AGCCGTTCAA CGACAAATAC GGCTTCCGCC AGGGCGATCG GGCGATCTTG
CTGTTTGCCG ATCTGCTGCG CAGCCAATTG GCCGAGGCCG GGTTCTTCAT CGGTCATGTC
GGCGGCGACG ACTTTTTCGC CGCTCTGCGC GAAGGGGTGC CGGCGGCGGT GACGGCGCGC
ATCCGCGCCC TGATCGACAA GTTCGCCGCC GATGTCACGG CCTTCTACGA CGACGAGACC
CGCCAAGCCG GCTGTGTGCT GGCGCGCGAT CGCGACGGGA TCGAACGCCG CCTGCCGCTG
CTTTCGGTCA GCGCCGCGCT GGTCCATCTC GCCCCCGGTC ATGCCATCGG CGATCTTGAT
CGCATCGGCG GCGTGATCGC CCGCCTGAAA AAGGCCGCCA AGCAATCGCC CTGTCATCTG
GCCGAAACGG TGGCTGGACC GGATATCCTG GTCGAAGAGC TTTAA
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| Protein sequence | MTVQASCVAD LSSLGRDVAL DPVISLRSGR VIGYQAVAGP PPGGREEDDL LLREAIEAAV
WSSAIALFAA VSAGRDQRLF LGLDFGLVVR WPDMAARLAM LLDAHGVDRR VITLSLSERR
SILDLGGGSG ERALDRVAGA VVQMRGAVGS IALDGFGGGH AGLALLAAVK PDYVVLDPYF
VSTQAIDQTR RLFLGHLVDV AHLLGAQVIA PQVEHLADYH ACRDAGCDLV RGPVLAKPDR
DPRRLPEVYP QVAALNATSQ RRGRGDQHLV AAQMDEIDPL MISTKMADVF ERFRRQKDRT
FFPVVDERGE PLGIVREVDL KEYTYSLYGK DLIGNKALGR TLSAFLTRCP RVDIDTRAEK
ILEAFSTTPS SDGLIITQDG RYRGFLTAAS LLRVINDKNL EVARDQNPLT RLPGNTVINT
ELGEILADDR QGASLVYLDF DHFKPFNDKY GFRQGDRAIL LFADLLRSQL AEAGFFIGHV
GGDDFFAALR EGVPAAVTAR IRALIDKFAA DVTAFYDDET RQAGCVLARD RDGIERRLPL
LSVSAALVHL APGHAIGDLD RIGGVIARLK KAAKQSPCHL AETVAGPDIL VEEL
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