| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3203 |
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| Symbol | |
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| ID | 3836649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3692386 |
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| End bp | 3694914 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637827318 |
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| Product | RNAse R |
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| Protein accession | YP_428285 |
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| Protein GI | 83594533 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.62845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCGC TGGCTCCTCT CTGGCATGAT GGCGCGGACC CCGGGAACGG GATCCGCGCC
CGCCGCGTTT TTCCCCAAGA CAGCCTTTGG CTTTCCCGGC CAAACCGGCG TTTTCCCGAC
CCTAAGGACA GCCCTTTGAC CCCCAAGGCC CCCAAGCACG TCCCCTTCCC CAGCCGCGAG
CAGGTGCTGG AGTTCATCCG CGCCGCCAAC GGCGAGGTCG ACCGACGCGA GATCGCCAGG
GCCTTCCACA TCACCGGACC AGAGCGCGCC GATCTGCGCA CCCTGCTTAA GGAGTTGGAG
AGCGAGGGCG CCCTGCAGCG CGGCCGTGGC CGCCGCATCG CCCCGCCGGG CAGCCTGCCC
GAGGTGGCGG TGCTGATCGT CGCCCGGGCG GACGCCGAGG GGGATCTGTT CTGCAAGCCC
GAGCATTGGC CAGAGGACGA GGAGCCGCCG CGCATCCTGC TGTGGCCCGA GCCCCATCAC
GCCCGGCGCC CGGGGGTCGG CGCCGAGATC GGCGTGGGCG ACCGCATCCT CGCCCGCCTG
ACCCGCATCG GCGACGCGCG TTATGACGCC CGCACGATCC GCCGGCTGGC GGCCGCCCCC
TCGCGCCTGC TGGGCGTGCT GGCCCTGGCC CGCGACGGCC TGCGCCTGCG CCCGACCAAC
CGCCGCGACC GCGACGAATA TCTGGTCGCC CCCGAGGATG CCGGCGGGGC CGAACCCGGC
GAGTTGGTCG AGGCCGAACT GCTGCCCTCG CGCCGCCTTG GCCTGCGTCG GGCCAAGGTG
ATCGAGCGGC TGGGCGGCCG CGAGGGGCCG CGCTCGATCA GTCTGGTCGT TGTCCATAGC
CACGACATCC CCGTTGATTT CCCGCCCGAG GCCCTGGCCG AAGCCGAGGC CGCCGTGGGC
GTCGACCTGC GCGGCCGCGA AGACCTGCGC GCCGTGCCGC TGGTCACCAT CGACGGCGAG
GACGCCCGCG ACTTCGACGA CGCGGTCTTC GCCGAACCCG ATGACGACCC GGCCAATCCC
GGCGGCTGGC GGGCGCTGGT CGCCATCGCC GATGTCGCCC ATTACGTTCG CATCGGCGCT
GCCCTCGACA AGGCGGCGCG CGAGCGCGGC AATTCGGTTT ATTTCCCCGA CCGCGTCGTG
CCGATGCTGC CCGAGGCGCT GTCGAACGGC TGGTGTTCCT TGCGCCCCAA TGAGGATCGC
GGCTGCCTCG CGGTGTGGAT GATCTTCGAC GCCGAGGGCA ACAAGCTGCG CCACCGCTTC
CTGCGCGGCC TGATGCGCTC GGCCGCCCGC CTGACCTATA CCCAGGTTCA GGCCGCCCGC
GACGGCCATG CCGACGATCT GACCGCGCCC TTGCAAGAGC GTGTCATCGC CCCGCTCTAC
GGCGTTTTCC AAGCGCTTCT GGGCGCGCGC AGCCGGCGCG GCACGCTGGA ACTCGACCTG
CCCGAACGCA AGGTGGTGCT TGATGACGGC GGCGAGGTGG CGCGCATCGA GCCGCGCCTG
CGCTTTGACA GCCACAAGCT GATCGAAGAA CTGATGATCG CGGCCAATGT CAGCGCCGCC
GAGACCCTGG AGGAAAAGCG CCGCCCCTGC ATGTACCGCG TCCACGACCA GCCGGCGCCC
GATAAGCTGG TGGCTTTGGG CGAATTTCTC GAGTCGCTCG ATATTCCCTT TCATAAGGGA
TCAATCAATC GGTCGGGCCA ATTCAATGGC GTGCTGAAAG CCGCCCGCGG CACGCCCCAC
GAGCATATGG TCAATGAGGT GGTTCTGCGC TCGCAAGCCC AGGCCGAATA CAGCCCCGAT
AACATCGGTC ATTTTGGCCT CGCCCTGCGC CGCTACGCCC ATTTCACCTC GCCGATCCGC
CGCTATGCCG ACCTGTTGGT CCACCGCGCG CTGATCGCCG GCCTGGGCCT GGGCGACGAC
GGCCTGCGAC CGGGCGCCGA AGAGGATTTC GTCGAGACCG CCGCCCATAT CACCGCCACC
GAGCGCCGCG CCGCCCAGGC CGAACGCGAC GCCGTCAACC GCTATACGGT CAGTTTCCTG
GCCGCCAAGG TCGGGGCGAC CTTCGCCGGC CGAATCAATG GCGTCACCCG CGCCGGGTTG
TTCGTCACCC TGGAGGACAC CGGCGCCGAC GGGCTGATCC CGATCGGCAG CCTGCCCAAC
GACTACTATG TCCATGATGA TGCCCATCAT TGTCTGCGCG GCCAGCGCGA CGGCCTGGAA
TTCCACCTGG GGGCGCCGGT CGAGGTTCTG CTGCGCGAGG CCAATCCGGT CAGCGGCGGG
CTGGTCTTCG GCTTGCTTCA AGGCGGGGTC GCCGGCGCCG CCAAGGGGCG GGGCTTCTCT
GGAAAAACCA AAGGTCGCGA CGGCCTTGGC AAGACCCGCT TGAAGGAGCG CGGCGCGGCG
GCGAAGCTCA AGAAAGGGGC GCGCGGCAAG CCCAAGGCGG CCGGGCGCGA CGCCTTGGCC
GGCGAGCCGG TCGGGAGCGG CCCCAAGAAA CGCCCGCCCA CCACGACCTC CCGTCGTAAA
ACCCGTTGA
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| Protein sequence | MPSLAPLWHD GADPGNGIRA RRVFPQDSLW LSRPNRRFPD PKDSPLTPKA PKHVPFPSRE
QVLEFIRAAN GEVDRREIAR AFHITGPERA DLRTLLKELE SEGALQRGRG RRIAPPGSLP
EVAVLIVARA DAEGDLFCKP EHWPEDEEPP RILLWPEPHH ARRPGVGAEI GVGDRILARL
TRIGDARYDA RTIRRLAAAP SRLLGVLALA RDGLRLRPTN RRDRDEYLVA PEDAGGAEPG
ELVEAELLPS RRLGLRRAKV IERLGGREGP RSISLVVVHS HDIPVDFPPE ALAEAEAAVG
VDLRGREDLR AVPLVTIDGE DARDFDDAVF AEPDDDPANP GGWRALVAIA DVAHYVRIGA
ALDKAARERG NSVYFPDRVV PMLPEALSNG WCSLRPNEDR GCLAVWMIFD AEGNKLRHRF
LRGLMRSAAR LTYTQVQAAR DGHADDLTAP LQERVIAPLY GVFQALLGAR SRRGTLELDL
PERKVVLDDG GEVARIEPRL RFDSHKLIEE LMIAANVSAA ETLEEKRRPC MYRVHDQPAP
DKLVALGEFL ESLDIPFHKG SINRSGQFNG VLKAARGTPH EHMVNEVVLR SQAQAEYSPD
NIGHFGLALR RYAHFTSPIR RYADLLVHRA LIAGLGLGDD GLRPGAEEDF VETAAHITAT
ERRAAQAERD AVNRYTVSFL AAKVGATFAG RINGVTRAGL FVTLEDTGAD GLIPIGSLPN
DYYVHDDAHH CLRGQRDGLE FHLGAPVEVL LREANPVSGG LVFGLLQGGV AGAAKGRGFS
GKTKGRDGLG KTRLKERGAA AKLKKGARGK PKAAGRDALA GEPVGSGPKK RPPTTTSRRK
TR
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