| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3202 |
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| Symbol | |
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| ID | 3836648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3689610 |
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| End bp | 3692357 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637827317 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_428284 |
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| Protein GI | 83594532 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGTCG TCGTCGTTGA ATCTCCGGCC AAAGCCAAAA CCATCAATAA ATATCTGGGC
AAGGACTACG TGGTCCTCGC GTCCTACGGC CACATCCGCG ACCTTCCCCC CAAGGACGGC
TCCGTCCGCC CGGACGAAGG CTTCGCCATG GACTGGGAGA TCGACGCCAA ATCCGAAAAG
CACGTCAAGG ACATCACCCA GGCCCTGAAG TCGGCCGACG GACTGCTGCT CGCCACTGAC
CCCGATCGCG AGGGAGAGGC GATTTCGTGG CATGTCCGCG ATGTTTTGGA AAAGCGCAAG
GCGCTGGTTG GCAAGCAGGT CCAGCGCATC ACCTTCAACG CCATCACCCG CTCGGCGGTT
GAAGAGGCCT TGCGCAATCC CCGCGATCTC GATACGCCGC TGGTCGAGGC CTATCTGGCC
CGCCGGGCGC TGGATTATCT GGTGGGCTTC ACCCTGTCGC CGGTGCTGTG GCGCAAGCTG
CCCGGATCGC GCTCGGCCGG CCGGGTGCAA TCGGTGGCCC TGCGGCTGAT CTGCGAACGC
GAGCAAGAGG TCGAGCGCTT TGTTTCGCGC GAATACTGGA CGGTCGACGC CATCCTCGCC
TCGCCCCAGG GGCAGATCTT CCGCGCCCGC CTCAGCCAGC TTGACGGCCA GAAGCTTGAT
AAATTCGGCC TGCCCGACGA AACGACCGCC CTGGCCGCCC TCGAGCGGAT CAAGGCGGCG
ACGCTGCGGG TGGAAAGTGT CGAGCGCAAG CAGGCGCGGC GCAATCCCGC CGCTCCCTTC
ACCACCTCGA CCATCCAGCA GGAAGCCTCG CGCAAGCTGT ATTTTTCGGC CCGCCAGACC
ATGCAGGTGG CCCAGAAGCT TTACGAGGGC GTGGACCTGG GCGGCGAGAC CGTCGGCCTG
ATCACCTATA TGCGAACCGA TGGCGTCTCG ATCGCCCCCG AGGCGGTCTT CGCCACCCGC
GATCTGATCG GCGCCGAATT CGGCGCGGCC TATCTGCCCG AACAGCCCCG CGTCTATAAG
ACCAAGGCCA AGAACGCCCA GGAGGCGCAC GAGGCCATCC GCCCCACCGA TGTGGCGCGC
ACGCCGCAAA GCGTCGCCCC TTATCTTACC GCCGAACAGC GTAAGCTGTA CGAACTGGTG
TGGAAGCGCA CGGTCGCCAG CCAGATGGCC AGCGCCATCC TTGATCAGGT CGCCGTCGAC
ATCGCCGATC CCGAGGCCAA GGTGGTGCTC CACGCCACCG GCTCGGTCAT CCAGTTCGAC
GGCTTCCTCA AGGTCTACCG CGAGGACTTC GACGATCGCC CCGAAAGCAG CCCCGATGGG
GCCGGCGAGG ACGAAAACCG CCTGTTGCCG CCCTTGCGCG AAGGCGATGG CGTCAAGCGC
GAGGACGTGA AGGCCGATCA GCATTTCACC CAGCCGCCGC CGCGCTATAC GGAAGCCAGT
TTGGTCAAGC GCATGGAAGA ACTGGGCATC GGCCGTCCCT CGACCTACGC CTCGATCCTC
AGCGTTCTTC AGGACCGGGA ATATGTGCGC CTTGATGCCC GGCGCTTCAT TCCCGAAGAC
CGCGGCCGTC TGGTCACCGC CTTCCTGGAA AACTTCTTTT CGCGCTATGT GCAGTATTCC
TTCACCGCCG ATCTGGAAAA CCAGCTCGAC GAGATTTCCG ACGGCAAGCT TGGCTGGAAA
ACCGTCCTTG AACGCTTCTG GATGGATTTC AAGGCGGCGA TCGAAGGCAC CGCCACCCTG
CGCGTCTCGG AAGTTCTGGA CGCCCTGGAC AAGGAACTGG GGCCCCACCT GTTCCCCCAG
GCCGAGGACG GCCACGATCC GCGCGTCTGC CCGGTGTGCT CGGCCGGTCG GTTGGGTCTG
CGCATCGGCA AGTTCGGCGC CTTCGTCGGC TGCTCGAACT ATCCCGACTG CAAGTTCACC
CGGCCGCTGG TCACCAAGGA AGGCGAAGGC GGCGACGGCG CCGCCCTGGC CGAGGATGGC
ACCAAGCCGC TGGGTAAGGA CCCGGTCAGC GGCGAGGACG TGACCCTGCG CAAGGGCCCC
TATGGGCTTT ATGTGCAAAA GGGCGAGGCG GCGCCGGTGG AAAAGGGCAA GAAGGCGGTC
AAGCCGCCGC GCGTGTCGAT CCCCAAGGAC ATGGACGCCG CCACCATCGA TCTTGATATC
GCCCTGAAGC TGCTGTCGCT GCCGCGCCCG GTCGGCGATC ACCCCGAAAC CGGCACGATG
ATCAGCGCCG GCATCGGCCG CTTCGGCCCC TATATCAAGC ACGGCGACAT CTATAAATCG
CTGCCCAAGG ACGATGACGT TCTGACCATC GGCCTCAACC GCGCCGTCAG CCTGTTGGCC
GAGGCCGGCA AGGGCGGCCG CGCCCGTCAG CCGGCGCGCA GCCTGGGCGA CCATCCCGCC
GACACCAAGC CGGTGACCAT CCACGACGGC CGCTTCGGTC CCTATGTCCA GCATGGCGGC
GTGCGCGCGA CCATTCCGCG CACCGCCGAT CCGGCGACCT ATACCCTGGC CGAGGCGGTC
GAGCTGATCG CCGCCAAGGC GGCCAAGGAC GGCGACGGCA AGAAGGCCCC GGCGAAGAAG
GCGGCGACCA AGGCTCCGGT CAAAAAAGCG GCGGCCGAGA AAAAGGCGCC GGCGAAGACC
GCGACCAAGA AAGCCGCGCC GAAAAAGGCC GCCGACTCGG CCGAAGACGC CCCGGCCAAG
GCGCCGCGCA AGAGCAAGGC CAAACCGGCG AGCGCCGATC CGGACTGA
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| Protein sequence | MHVVVVESPA KAKTINKYLG KDYVVLASYG HIRDLPPKDG SVRPDEGFAM DWEIDAKSEK
HVKDITQALK SADGLLLATD PDREGEAISW HVRDVLEKRK ALVGKQVQRI TFNAITRSAV
EEALRNPRDL DTPLVEAYLA RRALDYLVGF TLSPVLWRKL PGSRSAGRVQ SVALRLICER
EQEVERFVSR EYWTVDAILA SPQGQIFRAR LSQLDGQKLD KFGLPDETTA LAALERIKAA
TLRVESVERK QARRNPAAPF TTSTIQQEAS RKLYFSARQT MQVAQKLYEG VDLGGETVGL
ITYMRTDGVS IAPEAVFATR DLIGAEFGAA YLPEQPRVYK TKAKNAQEAH EAIRPTDVAR
TPQSVAPYLT AEQRKLYELV WKRTVASQMA SAILDQVAVD IADPEAKVVL HATGSVIQFD
GFLKVYREDF DDRPESSPDG AGEDENRLLP PLREGDGVKR EDVKADQHFT QPPPRYTEAS
LVKRMEELGI GRPSTYASIL SVLQDREYVR LDARRFIPED RGRLVTAFLE NFFSRYVQYS
FTADLENQLD EISDGKLGWK TVLERFWMDF KAAIEGTATL RVSEVLDALD KELGPHLFPQ
AEDGHDPRVC PVCSAGRLGL RIGKFGAFVG CSNYPDCKFT RPLVTKEGEG GDGAALAEDG
TKPLGKDPVS GEDVTLRKGP YGLYVQKGEA APVEKGKKAV KPPRVSIPKD MDAATIDLDI
ALKLLSLPRP VGDHPETGTM ISAGIGRFGP YIKHGDIYKS LPKDDDVLTI GLNRAVSLLA
EAGKGGRARQ PARSLGDHPA DTKPVTIHDG RFGPYVQHGG VRATIPRTAD PATYTLAEAV
ELIAAKAAKD GDGKKAPAKK AATKAPVKKA AAEKKAPAKT ATKKAAPKKA ADSAEDAPAK
APRKSKAKPA SADPD
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