| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3182 |
|---|
| Symbol | |
|---|
| ID | 3836628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3673301 |
|---|
| End bp | 3674227 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637827297 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_428264 |
|---|
| Protein GI | 83594512 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAA CGCTGGGGGC CATAGCGCCC GTTTTCCTGA TTATTTTGGT CGGATTTTTG
TTGCGCCGTT GGAAAGTCCT TTCCGATGGT TTCTGGCTAC CGGCCGAGAA GCTCACCTAC
TTCATCACCT TCCCCGCCCT GCTCGCCGCC AATCTGGCTG GCGCCGATCT TCGCGGCGTC
GCCTGGGCGC CGGTGGCGGC GGTATCGGTG GGGGGGATCT TTCTCATCGC CGCCCTGATG
CTGGCAGCGA GATCCTTGCT GGCGCGCCGC CTCGCCATCG GCGACCCGGC CTTCACCAGC
GTGTTCCAGG GGGCGATCCG GCCCAATACC TATATCGGGC TGGCTTTGGC GACGGTGCTG
TTCGGGCCCT TCGGCGTAAC CCTGATGGCC TTGTGCATCG CCATCGTCGT CCCGCTGGTC
AATGTGCTGG CCGTCGCCTG CATGGTCCGC TTCGGTCACG GTCAATCGGC CAGCCTGTCG
GCCATGGCGC GGGGCATCGC CACCAATCCG CTGATTCTCG CCTGCCTTGT CGGTATCGCC
ATGAACATCG GCGGCCTTGG CCTGCCGCCG GTTCTCGGTC CGGCCCTGAC CATCCTGGGC
AGTGCCGCCC TGCCGATCGG ATTGCTGGCG GTCGGGGCCG GCTTATCCGG GGTCGGCCTG
CGCCGCGCCG CCCCGGCCCT GCTGGTCTCC TCGGCCGCCA AGCTCGTCCT TCTGCCCGGG
CTGACCTTGA TCGGCGCCCT CGCTTTGGGG ATGGACGCCC CGACTACGGC GCTTTGCGTG
CTTTACGCCG CCTTGCCCTG CTCGCAATCC TCTTATGTGC TGGCCCGGCA GATGGGCGGT
GACGCGACCT TGATGGCGAC CGCGATCACC GTCCAAACCC TGCTGTCGGG ACTGTCCATC
CCGGTGTTCG TGCTGGCCCT GGTTTAA
|
|---|
| Protein sequence | MVETLGAIAP VFLIILVGFL LRRWKVLSDG FWLPAEKLTY FITFPALLAA NLAGADLRGV
AWAPVAAVSV GGIFLIAALM LAARSLLARR LAIGDPAFTS VFQGAIRPNT YIGLALATVL
FGPFGVTLMA LCIAIVVPLV NVLAVACMVR FGHGQSASLS AMARGIATNP LILACLVGIA
MNIGGLGLPP VLGPALTILG SAALPIGLLA VGAGLSGVGL RRAAPALLVS SAAKLVLLPG
LTLIGALALG MDAPTTALCV LYAALPCSQS SYVLARQMGG DATLMATAIT VQTLLSGLSI
PVFVLALV
|
|---|
| |