Gene Rru_A3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3172 
Symbol 
ID3836618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp3664184 
End bp3664819 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID637827287 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_428254 
Protein GI83594502 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTTT CGCCCGACAC CCTGTGGCTG TTCGTGCCGG CGGCTCTGGC GCTTAATCTG 
ACGCCGGGCA ATGACATGCT GTTTTGCCTG GGCCAGGGCA TGCGCGGCGG GCCGGCCGCC 
GGGATGGCCG CCAGCCTGGG GGTGGCGACG GGCGGGGTTG TTCATACGCT GCTCGCCGCC 
TTTGGCTTGG CCGCCCTGGT CGCCGCCCAT CCCGGGCTGT TCGCGGTGAT CCGCTGGGTT 
GGCGTGGGCT ATCTGCTGTG GTTGGGCCTG CAAACCCTGC GCCGGCCGAT GGCGCCCCCG 
GCTTTTGGGC AAGCGCCAGG GGGCTCCGCC GGGGTTCTCC GGGCGTGGCG CGAGGGGATC 
GTCGTCAATC TGCTCAATCC CAAGGTGGTG GTTTTCGTGC TGGCCTTTCT GCCCCAGTTC 
GTCAAACCCG AAGCCGGGCC GGCGGTGCCG CAGATGCTGG TGCTGGGCGG CATTCTGAGC 
CTGGGTGGTA CGGTGGTGAA CGGCGTGGTC GGCGCCCTGG CCGGCGGCAT CGGTCGCACC 
CTGGCGACCA GCGGCCGGGC GCGAGAGGTC TTTCGCTGGG TGAGCGGGCT GGTTTTCGTC 
GGGCTTGCCG CCCGTCTGGC TTTCGAACGG CGCTAA
 
Protein sequence
MIVSPDTLWL FVPAALALNL TPGNDMLFCL GQGMRGGPAA GMAASLGVAT GGVVHTLLAA 
FGLAALVAAH PGLFAVIRWV GVGYLLWLGL QTLRRPMAPP AFGQAPGGSA GVLRAWREGI 
VVNLLNPKVV VFVLAFLPQF VKPEAGPAVP QMLVLGGILS LGGTVVNGVV GALAGGIGRT 
LATSGRAREV FRWVSGLVFV GLAARLAFER R