| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3145 |
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| Symbol | mdoD |
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| ID | 3836591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3629170 |
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| End bp | 3630933 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637827260 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_428227 |
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| Protein GI | 83594475 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.680509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCTCGT TAAAAAGCGT TTTTTCCTTT CGCCACCGCC AATCCACCGG TATGGGAGGC
GCCGTCATTT CGCCCTTTAC GCTAAGGAAG AGCAGAATTA TTTTGAGGCC CCGGCCCGCT
GCGGCCGGCT CACCCGCACT CTTCCCTTCC TCTGGCGCTC GGCCCCCTCC CCAAATGACA
CTTTTAAACC GACGGTCGAT GCTCAAGGCT ACGGCAGCCG CCGCGGCGCT TGGCCTGTTG
AACACGGCAA TCCCCGCGGC CCGGGCGCAA GATGGCGTGC CCGGCCTCAC CTTCGGCCCC
GCGCAGCCGT TCTCCTTCGA GCTTCTGAAG GAAACCGCCC GGCGCATGGT TCACGAGCCC
TATGTCGGGC CGGCCAAGCC CGCTCCCGAG GTTGTCGAGC AAATCGATTA CGACGCCTGG
GGCAAGATCA AATTCGATCT CGACAAGGCG CTCTATGCCG ATGGCCCGGG GCGGTTCCCC
GTCAGCTTCT TCCACCTGGG CAAGTTCTTT GCCAAGGCGG TCGAGATGCA TGTGGTCGAG
GGCGGCGCCG CCCGCGAGAT CATCTATGAT CCCGCCCTGT TCGACATGCC CGCCGATTCC
CCGGCCCATC GCTTGGCCAA TGGCGCGGGC TTCGCCGGCC TGCGCATCCA GGAAGCCAAG
GACGGGGCGC TGGACTGGCG CAAGAACGAC TGGGTCGCCT TCCTGGGCGC GGCCTATTTC
CGCTCGATCG GCGCCTTGCA CCAATACGGG CTTTCGGCCC GGGCGGTGGC CTTGGATGTG
GCCCTGCCCG ACAAGGCCGA GGAATTCCCC GATTTCACCA AGTTCTATAT CGACAACTCG
GCGCCCGAAA ACGGCCTGAC GGTCTATGCC CTGCTGGAAG GGCCGTCGAT CGTCGGCGCC
ACCAAATTCG TCATGACGCG CGGCGCCGGC GTGATCATGG ACATCGAGCA GGCGCTGTTC
CTGCGCGCTG ATATCACGCG CTTTGGCATC GCGCCGCTAA CCTCGATGTA TTGGTTCTCG
GAAACCCGCA AGGCGACGGC CATCGACTGG CGCCCGGAAA TCCATGATTC CGATGGTCTG
GCGATGTGGA CGGGCGAGGG CGAACGGCTG TGGCGGCCGC TCAACAATCC GCCGCGCACC
ATGGCCTCGG CCTTTTCCGA CACCAATCCG CGCGGCTTCG GCCTGCTCCA GCGCGATCGT
GTTTTCGACC ACTATCTCGA TGGCGTTTAC TACGACCGCC GCCCCAGCCT GTGGGTCGAA
CCCAAGGGCC AATGGGGCAA GGGCACGCTG CAGCTGGTCG AGATCCCGAC CGACGATGAA
ATCCACGACA ACATCGTCGC GATGTGGGTG CCCGAAAAGC CGATCAAGGC CGGCGAGTCC
CTTGATCTCG CCTATCGCCT GCACTGGCAG GCCGACGAGC CGACGCCGAC CGATCTGGCG
CGCTGCGTCG CCACGCGCAT GGGCAACGGC GGCCAGCCCG GCCAGCCCCG GCCCAAGGGC
GTGCGCAAGT TCATGGTTGA ATTCCAGGGC GCGCCGCTGG CCGATTTGCC CTATGGCGTG
ATGCCCGAAG CGGTGCTGTG GTCGTCGCGC GGCACGTTCT CGTATATCTT CACCGAAGCC
GTTCCCGATG ACGTTCCCGG CCACTGGCGC GCCCAGTTCG ACCTGACCGT TTCGGGCAGC
GAACCGGTCG AGATGCGGCT GTTCCTGCGC AACGGCGATA AGACGCTCAG CGAAAGCTGG
GTCTATCAGT ACCATCCGTT TTAA
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| Protein sequence | MVSLKSVFSF RHRQSTGMGG AVISPFTLRK SRIILRPRPA AAGSPALFPS SGARPPPQMT
LLNRRSMLKA TAAAAALGLL NTAIPAARAQ DGVPGLTFGP AQPFSFELLK ETARRMVHEP
YVGPAKPAPE VVEQIDYDAW GKIKFDLDKA LYADGPGRFP VSFFHLGKFF AKAVEMHVVE
GGAAREIIYD PALFDMPADS PAHRLANGAG FAGLRIQEAK DGALDWRKND WVAFLGAAYF
RSIGALHQYG LSARAVALDV ALPDKAEEFP DFTKFYIDNS APENGLTVYA LLEGPSIVGA
TKFVMTRGAG VIMDIEQALF LRADITRFGI APLTSMYWFS ETRKATAIDW RPEIHDSDGL
AMWTGEGERL WRPLNNPPRT MASAFSDTNP RGFGLLQRDR VFDHYLDGVY YDRRPSLWVE
PKGQWGKGTL QLVEIPTDDE IHDNIVAMWV PEKPIKAGES LDLAYRLHWQ ADEPTPTDLA
RCVATRMGNG GQPGQPRPKG VRKFMVEFQG APLADLPYGV MPEAVLWSSR GTFSYIFTEA
VPDDVPGHWR AQFDLTVSGS EPVEMRLFLR NGDKTLSESW VYQYHPF
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